Gene Ddes_0298 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDdes_0298 
Symbol 
ID7283954 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 
KingdomBacteria 
Replicon accessionNC_011883 
Strand
Start bp359280 
End bp362816 
Gene Length3537 bp 
Protein Length1178 aa 
Translation table11 
GC content61% 
IMG OID643581083 
Productpyruvate flavodoxin/ferredoxin oxidoreductase domain protein 
Protein accessionYP_002478891 
Protein GI220903579 
COG category[C] Energy production and conversion 
COG ID[COG0674] Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, alpha subunit
[COG1013] Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, beta subunit
[COG1014] Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, gamma subunit 
TIGRFAM ID[TIGR02176] pyruvate:ferredoxin (flavodoxin) oxidoreductase, homodimeric 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCTCACA TGAAAACCAT GGACGGCAAT AACGCGACTA CGCACATTGC CTACGCTCTG 
TCGGAAACGG CGGCCATTTA CCCCATTACG CCCTCGTCCG TCATGGGCGA AGTGATGGAC
CAGATGGCTG CCAAGGGCAT GAAAAACCTG CTCGGGCAGA AAGTGATCGT GCGTGAAATG
CAGTCCGAGG CCGGCGCCGC CGGCGCTGTG CACGGCATGC TTTCCGCCGG CGCACTGACC
TCTACCTATA CGGCTTCCCA GGGCCTGCTC CTGATGATCC CCAACATGTA CAAAATCGCC
GGCGAACTGC TCCCCGGCGT TTTTCACGTG TCTGCCCGCG CCCTGGCCTC TCACGCCCTG
TCCATTTTTG GCGACCACCA GGACGTCATG GCCGCCCGTC AGACGGGCTT CTGCTTCCTC
GCTTCGGCTT CTGTGCAGGA ATGTATGGAC CTGGCCCTGG TGGCCCACCT TTCGTCCATC
GACTCCAGCC TGCCTTTCTG TCACTTTTTC GACGGCTTCC GCACCTCGCA TGAAGTGCAG
AAAATCGAAG TCATCGACTA CGAAGACATC CGTGGCCTGG TGAACTGGGA CAAGGTGGAC
GAATTCCGCG CCACCGCAAT GAATCCCGAG CATCCGCACA TTCGCGGCAC CGCCCAGAAC
CCCGATATTT ACTTCCAGAA CCGCGAAGCC TCCAACCTCT TCTACGACGC CGTACCCGGC
ATCGTGCTTG AAAACATGAA GAAGGTGGAG TCCATCACCG GTCGCAAGTA CCGCCTGTTC
GACTATGTGG GCCACCCCGA AGCCGACCGC GTTATTGTTT CCATGGGTTC CTCCTGTGAA
GTGGCTGAAG AAACGGTCAA CTACCTGAAC AGCCAGGGCC AGCGCGTGGG CCTTGTAAAG
GTACGTCTGT ACCGTCCGTT CTCCGCCGAG CACCTGCTGC GCGCCCTGCC CGCCACCACC
ACCTGCATCA CCGTGCTTGA CCGCACCAAG GAAAGCGGCG CCCTGGGCGA TCCCCTGTAC
CAGGACGTGT GCACCGCCTT CCTTGAAAAG GGCGAAGCTC CCACCATCGT GGCCGGCCGC
TACGGTCTCG GCTCCAAGGA CTTCACCCCG GGCATGGCCA AGGCCGTGTA CGACAACATG
CTGGGCCTCC AGCCCAAAAA CCACTTCACC GTGGGCATCA CCGACGACGT GACCAATCTT
TCCCTTGAAG TGGAAGAAGA AATCGACACC GTGCCCGCCG GCACCGTGCA GTGCAAGTTC
TTCGGCCTCG GCGCCGACGG CACCGTGGGC GCCAACAAGC AGGCCATCAA GATCATCGGT
GACAACACCG ACCTCTACGC CCAGGCCTAC TTTGCCTATG ACTCCAAAAA GTCCGGCGGC
TTCACCGTGT CGCACCTGCG CTTCGGCAAG GCCCCCATCA CTTCGTCCTA CCTCATCACC
AGTGCCGACT ACGTTGCCTG TCACAAGTCG GCCTATGTGA CCCAGTACGA CATTCTTGAA
GGCATCAAGG AAGGCGGCAC CTTTGTGCTG AACTCCAACT GGTCGCTGGC CGACCTTGAA
AAGCACCTGC CCGCCTCCAT GAAGCGCACC ATCGCCCGCA AGAAGCTCAA GTTCTACAAC
GTGGACGCCG TGAAGGTGGC CCAGGAAGTG GGCCTTGGCG GCCGCATCAA CATGATCATG
CAGACCGCCT TCTTCAAGCT GGCCAACGTG CTTGACTTTG ACAAGGCCGT GGCCCTGCTC
AAGGAATCCA TCAAGAAAAC CTACGGCAGC AAGGGCGACA AGATCGTCAA CATGAACATT
GCCGCCGTGG ACAAGGGCAT GGACGCCCTG GAAGAAATCA AATACCCCGC CACCTGGGCC
AATGCCACCG AAGGCGCTGA AGTGTGCCAC TGCGACGACG ATGACTACAT CCGCAGCGTG
GTGCGTCCCA TCCTGGCCCA GCAGGGCGAC AAGCTGCCCG TGTCGGCCAT GGATCCGGCC
GGCTTCATGC CGCTCGGCAC TGCCGCCTGC GAAAAGCGCG GCGTGGCCAT TGCCATTCCC
GAATGGCAGG TGGAAAACTG CATTCAGTGC TGCCAGTGCT CCTTCGTCTG CCCCCACGCC
GCCATCCGGC CCGTGCTGGC GACTGAAGAA GAGCTTGAAG GCGCTCCGGC CGCCTTTGCC
ACCAAGGACG CCATGGGCAA AGAACTGAAG GGCCTCAAAT TCCGCATCCA GGTCTACCCT
GAAGACTGCC TGGGCTGCGG CTCCTGCGCC GATGTGTGCC CGGCCAAGAA CAAGGCCCTG
GTCATGAAGC CCCTTGAAAC CCAGATGGAC GACCAGAAGG CCAACCTGGC CTTTGCCGAA
GCCCACGTGA GCCTCAAGGA CAAGCTGCTG GCCCGCGACA CCGTGAAGGG TTCGCAGCTG
CAGCAGCCCC TGCACGAGTT CTCCGGCGCC TGCGCCGGCT GCGGTGAAAC CCCCTACGTC
AAGGTGCTTA CCCAGCTCTT TGGCGAACGC ATGATCGTGG CCAACGCCAC GGGCTGCTCC
TCCATCTGGG GTGCTTCTTC GCCCACCACG CCTTACTGCA CCAACAAGGA CGGCTTTGGT
CCGGCCTGGG GCAACTCCCT GTTTGAAGAC GCCGCCGAAT ACGGCTGCGG CATGGGCCTT
GCCTACGATC AGCGCCGCAA CCTGCTGGCC ATGAAAATTG AAGAAGCCCT GAAAGAAGAA
GGCATCTCTT CCGAACTCAA GGAAGCCATG GAAGGCTGGC TCGCCAACAA GGACGACGCC
GAAGGCTCCC GCAAGTACGG CGACATGGTG CTTGCCAACC TTGATTCCTT TGAAAGCCCG
CTGGCTCACG AAATCTGGCA CATGGACGAC CTCTTCACCA AGAAGAGCGT GTGGATATTC
GGCGGCGACG GCTGGGGCTA CGACATCGGT TACGGCGGCC TGGACCACGT GCTGGCCACC
GGCGACGACA TCAACATCCT GCTGATGGAC ACCGAAGTGT ACTCCAACAC CGGCGGCCAG
TCCTCCAAGG CCACGCCCCT TGGCGCTGTG GCCCAGTTCG CGGCTGCGGG CAAGCGCACC
GGCAAAAAAG ACCTCGGTCG CATGGCCATG ACCTACGGCT ATGTGTACGT GGCCTCCATC
TCGATGGGTG CCGACAAGCA GCAGACCCTC AAGGCCTTCC GCGAAGCCGA AGCCTACAAG
GGCCCCTCGC TCATCATCGC CTACGCTCCC TGCATCAACC AGGGTCTGCG CAAGGGCATG
GGGAAGAGCC AGGAAGAATC CAAGCTGGCT GTGCAGACCG GCTACTGGCC CCTGTACCGC
TACCATCCCG AGCTGGCCAA GGAAAAGAAA AATCCCTTCC AGCTCGACAG CAAGGCCCCC
ACAGTGGACA TCCAGGAATT CCTGGGCGGC GAAACCCGCT TTGCCTCGCT GGAAAAAACC
GATCCCGAAG CTTCCAAGCA GCTGCGCGCG GAACTGGCTG ATGCCTACGC CGAACGCTAC
GCCCTGCTGA AGCAGCTGGC CGACCTCCCC TACCCGGACG CCAACGAAAC CAAGTAG
 
Protein sequence
MAHMKTMDGN NATTHIAYAL SETAAIYPIT PSSVMGEVMD QMAAKGMKNL LGQKVIVREM 
QSEAGAAGAV HGMLSAGALT STYTASQGLL LMIPNMYKIA GELLPGVFHV SARALASHAL
SIFGDHQDVM AARQTGFCFL ASASVQECMD LALVAHLSSI DSSLPFCHFF DGFRTSHEVQ
KIEVIDYEDI RGLVNWDKVD EFRATAMNPE HPHIRGTAQN PDIYFQNREA SNLFYDAVPG
IVLENMKKVE SITGRKYRLF DYVGHPEADR VIVSMGSSCE VAEETVNYLN SQGQRVGLVK
VRLYRPFSAE HLLRALPATT TCITVLDRTK ESGALGDPLY QDVCTAFLEK GEAPTIVAGR
YGLGSKDFTP GMAKAVYDNM LGLQPKNHFT VGITDDVTNL SLEVEEEIDT VPAGTVQCKF
FGLGADGTVG ANKQAIKIIG DNTDLYAQAY FAYDSKKSGG FTVSHLRFGK APITSSYLIT
SADYVACHKS AYVTQYDILE GIKEGGTFVL NSNWSLADLE KHLPASMKRT IARKKLKFYN
VDAVKVAQEV GLGGRINMIM QTAFFKLANV LDFDKAVALL KESIKKTYGS KGDKIVNMNI
AAVDKGMDAL EEIKYPATWA NATEGAEVCH CDDDDYIRSV VRPILAQQGD KLPVSAMDPA
GFMPLGTAAC EKRGVAIAIP EWQVENCIQC CQCSFVCPHA AIRPVLATEE ELEGAPAAFA
TKDAMGKELK GLKFRIQVYP EDCLGCGSCA DVCPAKNKAL VMKPLETQMD DQKANLAFAE
AHVSLKDKLL ARDTVKGSQL QQPLHEFSGA CAGCGETPYV KVLTQLFGER MIVANATGCS
SIWGASSPTT PYCTNKDGFG PAWGNSLFED AAEYGCGMGL AYDQRRNLLA MKIEEALKEE
GISSELKEAM EGWLANKDDA EGSRKYGDMV LANLDSFESP LAHEIWHMDD LFTKKSVWIF
GGDGWGYDIG YGGLDHVLAT GDDINILLMD TEVYSNTGGQ SSKATPLGAV AQFAAAGKRT
GKKDLGRMAM TYGYVYVASI SMGADKQQTL KAFREAEAYK GPSLIIAYAP CINQGLRKGM
GKSQEESKLA VQTGYWPLYR YHPELAKEKK NPFQLDSKAP TVDIQEFLGG ETRFASLEKT
DPEASKQLRA ELADAYAERY ALLKQLADLP YPDANETK