| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ddes_0292 |
|---|
| Symbol | |
|---|
| ID | 7283948 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011883 |
|---|
| Strand | + |
|---|
| Start bp | 349866 |
|---|
| End bp | 350996 |
|---|
| Gene Length | 1131 bp |
|---|
| Protein Length | 376 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 643581077 |
|---|
| Product | thiamine biosynthesis protein |
|---|
| Protein accession | YP_002478885 |
|---|
| Protein GI | 220903573 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0482] Predicted tRNA(5-methylaminomethyl-2-thiouridylate) methyltransferase, contains the PP-loop ATPase domain |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 2 |
|---|
| Plasmid unclonability p-value | 0.000151674 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGCACAC CTGATATTAT TGCGCTGTTT TCCGGCGGCC TGGACAGTAT CCTGGCGGCC
AAGGTTCTGG AGCGGCAAGG CCTTGCGGTG CGTTGCCTGC ATTTTATCAC GCCCTTTTTC
GGTTCGGCCA AGGCAGTGCC CTACTGGCAC AAGGTTTACG GGTTGGACAT CGTAAGCCGT
GACGTGAGCG AAGCCTTTGC GACCATGCTG CGGCAGCGTC CGGAGCATGG CTTCGGCAAG
GTCATGAACC CCTGTGTGGA CTGCAAGATC CTTCTGTTGC GCGAGGCGCG GAAATATATG
GAATCCGTGG GCGCAGCGGG GCTTGCCACG GGCGAGGTCC TGGGCCAGCG GCCCATGTCG
CAGCGGCGCG ACACCCTGCA TCTTATCATG CGTGATGCGG GCGTGGGCGG CATTCTGCTG
CGTCCTCTTT CCGCCACCCA TTTGCCGCCC ACACAGATGG AAGAAAGCGG CCTTGTGGAC
CGCACCCGGC TTTTAAGCTT TTCAGGCAGG GGAAGGCGTG ACCAGCTTGA TCTGGCGGCG
GAACTGGGTA TTACGGAAAT TCCCACTCCC GGAGGCGGCT GCCGCCTGAC GGAAAAGGAA
AATGCCCGTC GTTACTGGAC GGTGCTGACC CTGCTGCCCG AAGCTTCGGG CGAGGATTTT
GCCCTTGCCA ATCTGGGGCG CCAGTTCTGG CATCATGAAG ACGGGCGGCA TTACTGGCTG
TGCATCGGGC GCAACAGTGC GGATAATGAC AGGCTGGCCG CCGCGGTTCG TCCTGGCGAT
CTGTTGTTGC GCCTGCGCGA CCTGGCCGGG CCGATGGCAC TGGCACGCTC CGGCACGGAA
TGGCCGCGCC CTGTGCTTGA AAGCGCTGCC GCGCATGTGG CTTCCTATGC GCCGAAGGCT
ATGGCCCACG GCGGGGCAGT TGCTGTGCGG GCGCGTCAGG GAATGGAAGA TGAAGCCGCG
CTTGATCTGG ACGTGCTGCC GCAACGGCTG GGCGAAGCCT GGGGCGAAAC GCCCTGGGAC
GATGTGAAGG CCGTCATCAG GGCAGAAGCC AGGGAAAGGT TTGCAGCAAT GCCGCATGGG
CGCGTAACAG ACCGGGATGC TGCTGAAAAT CAGGATCCTT CACAGATGTG A
|
|---|
| Protein sequence | MSTPDIIALF SGGLDSILAA KVLERQGLAV RCLHFITPFF GSAKAVPYWH KVYGLDIVSR
DVSEAFATML RQRPEHGFGK VMNPCVDCKI LLLREARKYM ESVGAAGLAT GEVLGQRPMS
QRRDTLHLIM RDAGVGGILL RPLSATHLPP TQMEESGLVD RTRLLSFSGR GRRDQLDLAA
ELGITEIPTP GGGCRLTEKE NARRYWTVLT LLPEASGEDF ALANLGRQFW HHEDGRHYWL
CIGRNSADND RLAAAVRPGD LLLRLRDLAG PMALARSGTE WPRPVLESAA AHVASYAPKA
MAHGGAVAVR ARQGMEDEAA LDLDVLPQRL GEAWGETPWD DVKAVIRAEA RERFAAMPHG
RVTDRDAAEN QDPSQM
|
|---|
| |