Gene Ddes_0284 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDdes_0284 
Symbol 
ID7283940 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 
KingdomBacteria 
Replicon accessionNC_011883 
Strand
Start bp337388 
End bp338524 
Gene Length1137 bp 
Protein Length378 aa 
Translation table11 
GC content62% 
IMG OID643581069 
ProductSerine-type D-Ala-D-Ala carboxypeptidase 
Protein accessionYP_002478877 
Protein GI220903565 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1686] D-alanyl-D-alanine carboxypeptidase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCCAGCC GTTACCGCCA CAAGAGGTTC AGCTTCCTCA ATGTGTTTGC GTATCCTTTC 
CTGTTTTTGC TGCTGGCCTG CCTGCTGCGT CCCGGCCCCG GACAGGCCGC CCCCCCCATT
CCGGAACACG GTTTTCTGGA AACAAGTTCC GCCATTCTGT ACGATCTGGA CCACGATGCC
ATTCTTTTTG AGCAAAACGC CGACCAGCGC ATTGCCCCGG CATCACTGAC CAAGGTCCTT
TCAATGTTTC TGGCCCTGGA CAGCGTGGAT CAGGGCAAGC TGAGCCTGGA CAATACCGTA
ACGGTCAGCC GTGCCGCCGC AGGAACCGGC GGTTCACGCA TGGGCCTGCG GGAAAATGAC
GTGGTGAGCC TTGAACAGCT GCTCATGGGC ATGGCTGTGT CTTCGGGCAA TGATGCCAGC
ATGGCTGTGG CGGAATGTGT GGGCGGTTCG ACTCCGGCTT TTGTAGCCAT GATGAATGCC
AAAGCGCAGG CCCTGGGCAT GCGCGACAGC CAGTTCCGCA ATCCCCACGG GTTGCCCGCC
AAAGGCCAGT ACACCACGGC CCGCGACATG CTCACCCTGG CACGGGCCTA TCTGCAGGCC
CATCCCCAGG CCCTGCGTTT TCACAACACC CACACCATCA GCCATAAAGG GCGCGTCACC
TGGAACAAGA ACCCCCTGCT GGGCCAGTAC CCCGGCGCGG ACGGGCTTAA AACAGGCTGG
GTCAACGCCT CGGGCTACAA TCTTATCTTC ACGGCCAGCC AGGGGCCCAG ACGCCTGCTG
GCCGTCATTC TGGGCGCGCC CGACTCGCGC ACGCGCGGGG TTGAGGCGTT TCGCCTGCTG
GATGCCGGAT TTCAGGTATG CGGCAACAAT GCCGCATCGG TGGTGGCAGC CCTGGATTGT
CTGCCCCCGG AACGCTATAA CCCCGACATG CGCAAGACAG CCCGCGAGGC CCGGCGTATG
TATGCAGGCA GCGATGCCGC ACCTCGCAAA AACGTGAGCA AGGCCAAGGC CGGCAAGGCC
CCTCAGGCCA AGCAGACGGC AAAAGCAAAG CCCAAAAAGA AAGAGGCCCA CAAGGCCGCG
CGACAAAAGC GCGATTCCGG CCAGGCAGCC AGATCCGGCT CTGGACGGGC GGGCTAG
 
Protein sequence
MPSRYRHKRF SFLNVFAYPF LFLLLACLLR PGPGQAAPPI PEHGFLETSS AILYDLDHDA 
ILFEQNADQR IAPASLTKVL SMFLALDSVD QGKLSLDNTV TVSRAAAGTG GSRMGLREND
VVSLEQLLMG MAVSSGNDAS MAVAECVGGS TPAFVAMMNA KAQALGMRDS QFRNPHGLPA
KGQYTTARDM LTLARAYLQA HPQALRFHNT HTISHKGRVT WNKNPLLGQY PGADGLKTGW
VNASGYNLIF TASQGPRRLL AVILGAPDSR TRGVEAFRLL DAGFQVCGNN AASVVAALDC
LPPERYNPDM RKTAREARRM YAGSDAAPRK NVSKAKAGKA PQAKQTAKAK PKKKEAHKAA
RQKRDSGQAA RSGSGRAG