Gene Ddes_0209 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDdes_0209 
Symbol 
ID7283863 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 
KingdomBacteria 
Replicon accessionNC_011883 
Strand
Start bp260281 
End bp260916 
Gene Length636 bp 
Protein Length211 aa 
Translation table11 
GC content61% 
IMG OID643580993 
Productthiamine-phosphate pyrophosphorylase 
Protein accessionYP_002478803 
Protein GI220903491 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0352] Thiamine monophosphate synthase 
TIGRFAM ID[TIGR00693] thiamine-phosphate pyrophosphorylase 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCAAGAA TTCTTCCCGG TGAAACAGAT ATTTATGCCA TTACTGATTC CCGCCTGTCG 
CTGGGGCGCT CCCTTGAAGA GGTGGCTTCA GCCCTGCTGG GGGCGGGCGT GCGTCTTTTG
CAGTACCGCG AAAAAAATTT CAAAGGCGGT GAAATGCTTG AAGAATGCCG CCTGCTGCGC
CGCCTGACCC GTGAGGCGGG GGCCTGCTTT ATTGTTAACG ATCATGTGGA TATTGCCATG
CTTGTGGATG CTGACGGCGT GCATGTGGGG CAGGAGGACC TGCCTGTGCC TGAAGTGCGC
AGGCTTGTGG GACCGGACAT GATCATCGGC CTTTCCACCC ACGAGCCGGA TCAGGCGCTG
GCCGCGCGGG CGCTGGGGGC GGACTATCTG GGTGTTGGCC CCATTTTCGC CACGCAGACC
AAGGAAGATG TGGTGGCCCC CGTGGGTTTT GGTTATCTGG ATTGGGTTGC CGCCAACATT
GATATGCCTT TTGTAGCCAT AGGCGGCATC AAGGCCCACA ATATCGCTGA AGTGGCCCGC
CACGGCGCGC GCTGTTGCAG CCTGGTTTCC GAACTGGTGG GCGCGCCGGA CATTGCCGCG
CGTGTGGATG CCGTGCGGCG GGCCATGCGC GGCTAG
 
Protein sequence
MPRILPGETD IYAITDSRLS LGRSLEEVAS ALLGAGVRLL QYREKNFKGG EMLEECRLLR 
RLTREAGACF IVNDHVDIAM LVDADGVHVG QEDLPVPEVR RLVGPDMIIG LSTHEPDQAL
AARALGADYL GVGPIFATQT KEDVVAPVGF GYLDWVAANI DMPFVAIGGI KAHNIAEVAR
HGARCCSLVS ELVGAPDIAA RVDAVRRAMR G