| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ddes_0187 |
|---|
| Symbol | |
|---|
| ID | 7283841 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011883 |
|---|
| Strand | + |
|---|
| Start bp | 236171 |
|---|
| End bp | 237544 |
|---|
| Gene Length | 1374 bp |
|---|
| Protein Length | 457 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 643580973 |
|---|
| Product | two component, sigma54 specific, transcriptional regulator, Fis family |
|---|
| Protein accession | YP_002478783 |
|---|
| Protein GI | 220903471 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGAAGAACA GCATTCTTGT AGTGGACGAT GACGACGCGC ACCGCGGTAT GCTGCGAACC
ATGCTTCGTT CCTGGGACTA TGTGGTGGAG GAGGCTGCCG ACGGCGATGA GGCGGTGGCT
CTTGTACGGG AAAAGGCCTT TGACGCCGTG CTGACCGACG TGCGCATGGC GCGCATGAAC
GGCATACACG CGCTCAAGGG GATTCTTGCA TATAATCCCG CGCTGCCTGT CATTCTCATG
ACGGCGTATT CCTCGGTGGA AACAGCCGTG GAGGCTTTGC GCCTGGGGGC GTATGACTAT
CTGGTCAAGC CTCTGGACTT TGAAAGCCTG AAGCATTCCT TGCAGCAAGG CATTGAGCGT
TCGCGCCTGA GTGTCGAAAA TCGCGAACTG CGCCGTCAGT TGAGTCACGC GGCGGCCATG
CCCGGCATTA TCGGCCGCAG TCCGGCCATT CGCGCCATGC AGGAAATCAT GGATACCGTG
GCCCCCACCG AAGCCACGGT GCTCATTACC GGCGAGTCGG GAACCGGCAA GGAGCTGGTG
GCCCGCGCCC TGCACGGCAA AAGCCTGCGC GCCGATAAAC CCCTTGTTAC CGTCAACTGT
GCGGCTCTGG CGGAAAACCT GCTGGAATCA GAATTGTTCG GGCATGAAAA AGGCTCGTTC
ACCGGTGCGG AGCGCCGTCG CGAGGGGCGC TTTGCCCAGG CGCACGGCGG CACGCTCTTT
CTGGACGAAG TGGGTGAGAT GCCCCTTTCG CTTCAGGCCA AGCTGCTGCG TGCCCTGCAG
CAGGGTGAGG TGCAGCGCGT AGGCTCTGAC ACGCAGCTCA CTGTGGATGT GCGCGTACTG
GCCGCCACCA ACCGTGACCT GCGGCATGAG GTGGCGCACA GGCGTTTTCG CGAAGACCTG
TTTTTCCGCC TGAATGTCAT CAGTGTTGAA GTGCCGCCCC TGCGTGAAAG GGCAGAAGAC
ATTCCTGTGC TGGCGGCATA TTTTCTGGAA AATTTTGCCA GTCGTAACCG CAAGGCCGTG
CGCGGGTTTT CCGCGCAGGC GCTTGACATC ATGCTGCGGC ATTCCTGGCC GGGCAATGTG
CGCGAACTGG AAAATGCCGT GGAGCGGGCT GTTATTCTCT GCACCGGCGA CCTTATCACC
GCGCGCGAAC TGCCCTCTGT GCTGTCTGAA ACCGTTGCGG CGGCAGAAGC TCCGGCGGAA
GCTCCGGCAG AAGCGGATCT TTCTCTGGCG GGTCTGCCCC TGGATGAGGT GGAGCGCCGG
GTCATTGAGG AAACCCTGCG CCAGACCGGC GATAACAAGA GTGAGGCCGC GCGCCGCCTG
GGCATTACCC GCGCCACCCT GCACAACAAG CTGCGCAAGT ACGAGCTTGA ATAA
|
|---|
| Protein sequence | MKNSILVVDD DDAHRGMLRT MLRSWDYVVE EAADGDEAVA LVREKAFDAV LTDVRMARMN
GIHALKGILA YNPALPVILM TAYSSVETAV EALRLGAYDY LVKPLDFESL KHSLQQGIER
SRLSVENREL RRQLSHAAAM PGIIGRSPAI RAMQEIMDTV APTEATVLIT GESGTGKELV
ARALHGKSLR ADKPLVTVNC AALAENLLES ELFGHEKGSF TGAERRREGR FAQAHGGTLF
LDEVGEMPLS LQAKLLRALQ QGEVQRVGSD TQLTVDVRVL AATNRDLRHE VAHRRFREDL
FFRLNVISVE VPPLRERAED IPVLAAYFLE NFASRNRKAV RGFSAQALDI MLRHSWPGNV
RELENAVERA VILCTGDLIT ARELPSVLSE TVAAAEAPAE APAEADLSLA GLPLDEVERR
VIEETLRQTG DNKSEAARRL GITRATLHNK LRKYELE
|
|---|
| |