Gene Ddes_0161 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDdes_0161 
Symbol 
ID7283815 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 
KingdomBacteria 
Replicon accessionNC_011883 
Strand
Start bp199816 
End bp201738 
Gene Length1923 bp 
Protein Length640 aa 
Translation table11 
GC content62% 
IMG OID643580949 
Productpenicillin-binding protein 2 
Protein accessionYP_002478759 
Protein GI220903447 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0768] Cell division protein FtsI/penicillin-binding protein 2 
TIGRFAM ID[TIGR03423] penicillin-binding protein 2 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.806413 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTGCGGA AAATTAAAAA GAACAGTCTG CTGGGCGCGA AAGATAAAAA CGCCCGCAAA 
GGCATACGCT CCTGGCTCAA AATCCAGGTA GAGGGCGAGC GCTACCAGCC TCCTCGGGGC
GGGATCATCC TGCTTCAGAT TCTGGTAGGC CTGCTGTTCT TCGTGCTCGT GGTGCGCTTC
TGGTACCTGC AGATGCACCG CGGCGCGGAA TTTGCCCAGC AGGCGCAGAA CAACCGTCTG
CGCATCGAGC GCATCTTCGC CCCGCGCGGG CGCATCATGG ACGATCAGGG CAAGGTGCTG
GCCGACAACC GCACGGCCTA CGGCCTTTCC CTCGTACGCG AAGACTGCCC CGACATACCG
GCCACCCTGG CCCAGATCAG CGCATGGTCG GGCATTCCCC TGCCCCAGAT ATGGGAAAAA
TTCCGGCAGG ACAGGTTCAA GGTCAAATCA TTTGAACCCC TGCTCATGAT CACTGACATT
GACTTTGATC TTGTGGCCCG CATCGAGTCC GAAATCCACG CCTGGCCCGG CCTGGAAATC
GTTGTGCGCA CCAAGCGCAG CTATCCCGAA AAAGACCTGT TCGCGCACGT GCTCGGCTAT
GTGGCCGAAG CCAACGAGCA GGAGATGGCC GCAGACAGTG CCCTGGCCAT GGGCGACCTT
GTGGGCAAGC AGGGGCTGGA GCTGGAGCTG GAAAAGCAGC TGCGCGGGCG CAAGGGCCTG
TACGACGTGG AAGTGGACGC CCATTCCCGC GTACTGGGCA AATTTTTGCG CGAAGAGCCG
CGCGGCGGCA AGGAAATACG CCTTTCACTG GACAGGGACC TCCAGGAGGC CGCTTGGAAC
GCCCTGGGTG GCGAAGCGGG CTGTGTGGTG GTGATGGAAC CGGATACCGG CAAGCTGCGT
GCGCTGGTCA CCTCCCCGGC CTACGACAAC AACCTGTTCG CGGCGGGCAT TTCACAGCGC
GACTGGGACG CCCTGCGCAC CAACAGCCGC TTTCCCCTGC AAAACCGCGT CATTCAAAGC
GTGTACCCGC CCGGTTCCGT CTGGAAGCTG GTCATAGCGG CCATGCTGCT CGAACGCGGC
GTCAACCCGC GCGAAAGCGT GTTCTGTCCG GGGCAGGTCA AGCTGGGCAA CCAGATATTC
CGCTGCTGGA AGCGCGGCGG GCACGGCTCG CAAGACATGC AGAGCGCGCT GGTCAATTCA
TGCGACGTGT ATTTTTACCA GATGGGCGAA CGCATGGGCA TTGACAAGAT AGAGGAATTT
GCCAAGGCTA GCGGCTTCGG ACGCCCCACC GGCATTGACC TGCCGCACGA AAAATCCGGT
CTCGTGCCTT CCAAGGAATG GAAAAAGCGC CGCTTCGGAC GGCCCTGGGT GCGCGGTGAA
ACGTACAACG TATCCATCGG CCAGGGCTAC ACCCTTGTCA CCCCTGTGCA GATGGCTGTT
TTTGTGTCGG CCCTGCTCAA CGGCGGCAAC CTGCTCAAGC CGCAGTTGCT GGACGATGCC
CAGCGTGAGA TCAAGGGCAA TATTCCCGCC AAGGCAGCAA CCCTCAATTT TGTGGTTGAG
GCCATGCGCA AGACGGCCAC AGGCGGCACC GCAAGGATCG TGAACCGCAA GGACGCCGAC
ATGGGCGGCA AAACCGGCAC GGCCCAGGTG GTCAAGCTCA AGATGGCCGC CGGAGACCGC
CGCCTGCGCA CACATGAAAT GGAATACGCC CAGCGCGACC ACGCCTGGAT AACGACCTGG
GGCGTCAAGG ACGGCAAGGC TTACGTGGTG GTAGTTATGG TGGAGCACGG CGGCGGCGGC
TCCAGCGTTG CAGGCCCGGT AGCCAAAAAG GTATACGAGC ACCTCTTTGG CCCTGACCCC
GGATCGCCTG CGGCGCCCGC GCCTGTGCCA GCGCCGGCCA GCCCCGGCGA ACGGACAGAC
TAG
 
Protein sequence
MLRKIKKNSL LGAKDKNARK GIRSWLKIQV EGERYQPPRG GIILLQILVG LLFFVLVVRF 
WYLQMHRGAE FAQQAQNNRL RIERIFAPRG RIMDDQGKVL ADNRTAYGLS LVREDCPDIP
ATLAQISAWS GIPLPQIWEK FRQDRFKVKS FEPLLMITDI DFDLVARIES EIHAWPGLEI
VVRTKRSYPE KDLFAHVLGY VAEANEQEMA ADSALAMGDL VGKQGLELEL EKQLRGRKGL
YDVEVDAHSR VLGKFLREEP RGGKEIRLSL DRDLQEAAWN ALGGEAGCVV VMEPDTGKLR
ALVTSPAYDN NLFAAGISQR DWDALRTNSR FPLQNRVIQS VYPPGSVWKL VIAAMLLERG
VNPRESVFCP GQVKLGNQIF RCWKRGGHGS QDMQSALVNS CDVYFYQMGE RMGIDKIEEF
AKASGFGRPT GIDLPHEKSG LVPSKEWKKR RFGRPWVRGE TYNVSIGQGY TLVTPVQMAV
FVSALLNGGN LLKPQLLDDA QREIKGNIPA KAATLNFVVE AMRKTATGGT ARIVNRKDAD
MGGKTGTAQV VKLKMAAGDR RLRTHEMEYA QRDHAWITTW GVKDGKAYVV VVMVEHGGGG
SSVAGPVAKK VYEHLFGPDP GSPAAPAPVP APASPGERTD