| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ddes_0100 |
|---|
| Symbol | |
|---|
| ID | 7283752 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011883 |
|---|
| Strand | - |
|---|
| Start bp | 129739 |
|---|
| End bp | 130443 |
|---|
| Gene Length | 705 bp |
|---|
| Protein Length | 234 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 643580886 |
|---|
| Product | Lysine exporter protein (LYSE/YGGA) |
|---|
| Protein accession | YP_002478698 |
|---|
| Protein GI | 220903386 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG1280] Putative threonine efflux protein |
|---|
| TIGRFAM ID | [TIGR00949] The Resistance to Homoserine/Threonine (RhtB) Family protein |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGATTTCAC TGGAAAACCT GCTGTTGTTC GTACCCATGG CGGCACTGCT GGTCATGCTG
CCGGGACCGG ACTTTGCCCT TATCGCCAAA ATATCGCTGC TCAACGGCCG CCCCCAGGGG
CAGGCCGCAG CCTGTGGTGT GGCCCTGGGC ATAAGCGTAC ATACCACGGC CGCCATGCTC
GGCATTTCCG CCATCATCGC GCAGTCCGTG TTGTGGTTCA GCATCCTGAA ATACGTGGGC
GCGGCCTACC TTATCTGGCT CGGCATCCAG GCATTGCGTC ATGGGCGCCA GGCCAGCGCG
GCGGTGGTGA AGGTTGCTCC GCAGGCTGAC GACCTGAAAG AGCATGCCCC GGCGCACGGC
GTCATGAAAA AACCCGCAGC CGCTCCACAC CTTACGGGCC GCCAGTGGTG GTCGTTTTTT
CGTCAGGGCT TTCTGACCAA TGCCCTGAAC CCCAAGGCCG TCATCATATT CCTGACGTTT
CTGCCGCAGT TCATGAATCC GCACGCTCCG CTTGGCCCGC AGTTTCTGGA GCTTGGCGGC
ATACTGTCGG CCCTGTGCCT GCTCTGGTAT GTGCCCCTGG CCTACATGCT CGGCCGTGTG
CGTCATATCT TTGAAAGCAG TCGCTTTCAG CTCTGGCTGC AACGCTTTAC AGGTTTTATT
TTCATAGCCT TCGGCCTCAA ACTGGCCGCG GCGCAGTCCC GCTAA
|
|---|
| Protein sequence | MISLENLLLF VPMAALLVML PGPDFALIAK ISLLNGRPQG QAAACGVALG ISVHTTAAML
GISAIIAQSV LWFSILKYVG AAYLIWLGIQ ALRHGRQASA AVVKVAPQAD DLKEHAPAHG
VMKKPAAAPH LTGRQWWSFF RQGFLTNALN PKAVIIFLTF LPQFMNPHAP LGPQFLELGG
ILSALCLLWY VPLAYMLGRV RHIFESSRFQ LWLQRFTGFI FIAFGLKLAA AQSR
|
|---|
| |