Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ddes_0086 |
Symbol | |
ID | 7283737 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 |
Kingdom | Bacteria |
Replicon accession | NC_011883 |
Strand | - |
Start bp | 112349 |
End bp | 114148 |
Gene Length | 1800 bp |
Protein Length | 599 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 643580871 |
Product | methyl-accepting chemotaxis sensory transducer with Cache sensor |
Protein accession | YP_002478684 |
Protein GI | 220903372 |
COG category | [N] Cell motility [T] Signal transduction mechanisms |
COG ID | [COG0840] Methyl-accepting chemotaxis protein [COG4564] Signal transduction histidine kinase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCTCAGAA ATATCAGTAT CGCCCAAAGG ATCACCTGCT TTGTCACCCT GATGATCGCC ATGGTCATCG CCATGGCAGT CCTGTCCTTT TTTATGACCA GCAACGTCAT TGATGAAGGA ACCTCGGTTG CCAGAAACCA GTTGCTGGAT TCACAGCGCG CCCGCATCAA GGACGTTACC CAGGCATCGG CCCTCGGCCT GGCTGCCATG ACCAGAGGGC TGCCCCCACA GGAGCAGCTG GGCGTTATTG CCGACTACAT AGAAAAATCC CGCTTTGAGG ACGATGCTTC GGGCTATTTT TATGTCTATG AAGGCACCGT CAACGTAGCC CACCCCACAC AAAAACAGCT TGTCGGCAAG GATCTGTCCG GCACCGCCGA CAAACAGGGC GTACACTACG TGGTGGAGCT GCACAAAGCT GCGGCAAAGG GCGGTGGATT TGTGGACTTT GTCTTTCCCA AACCCGGCGC CGGTGACGTT TTCAAACTTG GCTATGCGGA AAAAATAGAA GGCACGCCCT ACTGGATCGG CACGGGGGTG TACATTGACA ATGTAGACAG GGAAGAAAAC AGGCTGCACA GCACCATGGG CAGCCTGCTT ACCCGAACCC TCGGCACGTA TGGCGGCGGT TTTCTTGCGG CGCTGCTGCT CATTGTCGTG CCGCTTTCCT ATCGCCTGGC CACCTCCATC ACCCGCCCCC TGGCCGGAAT CACCGGACAG GCTCGCGCCG TGGCCGCAGG CAATCTTGAT GTAACCATCA CGCCTGACGG CAAAGACGAA GTGGCCCTGC TGGAACGGGC CTTGCGCGAC ATGGTGGACA AACTGAAAAA GCTCATCAAT GAAACGGCAG AAAAAAGCCG CCAGGCCGAC GAGGCCGCCA ATGAGGCCAG AGTCGCCCAA AGCCGGGCCG AACTGGCCGG GCAGGACGCG CAGGCCAAAG CTGCCGCCAT GCTTGTGGCT GCCGACAGGC TTGAGCAGGT GGCCCATGCG GTCAGCACCG CCTCGACCCA GCTTTCCACC CAGATCGAGC AGTCCGACAG GGGCGCGATG GATTCGGCCC AGCGCCTCAC CGAGGCCGCG GCAGCCATCA ACCAGATGAA CGCCACGGTG CAGAGTGTGG CCCAAAACGC AACCCAGGCC TCCGCAAGCT CCCACGACAC GCGCGAAAAG GCCGTAGCCG GGGCGCACAT TGTCGAGCAG GCCGTACGCA GCATCAGCCA GGTGCACGAA GTTTCGCAGC GCCTGACGGA AAATATGGGG CAGCTCAATG ATCAGGCCCA GGCCATCAGC AAGATCATGA ACGTCATCTC CGACATCGCG GACCAGACCA ACCTGCTGGC CCTTAATGCC GCCATTGAGG CGGCCCGCGC AGGAGACGCA GGGCGCGGCT TTGCCGTGGT GGCCGACGAG GTGCGCAAAC TGGCCGAAAA AACCATGGCC TCCACCCACG ATGTGGGCGC AGCCATCACC TCCATCCAGG CGAGCACGGC CAAAAGCATG ACCGCGATGG AAACTGCCAC AGAACAGGTG AGCCAGGCCA CGGAATTCGC CCATCAGTCC GGTCAGGCTC TGGAAGAAAT CGTCAGTACG GTGGAAGCCA CGGCCGACCA GGTCAACGCC ATTGCGGCGG CCAGCGAGCA GCAGTCCGTT GCCAGCGAAG AGATCAACCG CTCCATCAGC ACAGTAAACG ATGTGGTGCA GCAAACCGCT GAAGCCATGC ACGAGGCGGC CCTTGCCGTC AGTGACCTGG CCCGGCAGGC ACAGAACCTG AGCAGCCTCA TCGGTGACAT GAAAAAATAA
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Protein sequence | MLRNISIAQR ITCFVTLMIA MVIAMAVLSF FMTSNVIDEG TSVARNQLLD SQRARIKDVT QASALGLAAM TRGLPPQEQL GVIADYIEKS RFEDDASGYF YVYEGTVNVA HPTQKQLVGK DLSGTADKQG VHYVVELHKA AAKGGGFVDF VFPKPGAGDV FKLGYAEKIE GTPYWIGTGV YIDNVDREEN RLHSTMGSLL TRTLGTYGGG FLAALLLIVV PLSYRLATSI TRPLAGITGQ ARAVAAGNLD VTITPDGKDE VALLERALRD MVDKLKKLIN ETAEKSRQAD EAANEARVAQ SRAELAGQDA QAKAAAMLVA ADRLEQVAHA VSTASTQLST QIEQSDRGAM DSAQRLTEAA AAINQMNATV QSVAQNATQA SASSHDTREK AVAGAHIVEQ AVRSISQVHE VSQRLTENMG QLNDQAQAIS KIMNVISDIA DQTNLLALNA AIEAARAGDA GRGFAVVADE VRKLAEKTMA STHDVGAAIT SIQASTAKSM TAMETATEQV SQATEFAHQS GQALEEIVST VEATADQVNA IAAASEQQSV ASEEINRSIS TVNDVVQQTA EAMHEAALAV SDLARQAQNL SSLIGDMKK
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