Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ddes_0081 |
Symbol | |
ID | 7283732 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 |
Kingdom | Bacteria |
Replicon accession | NC_011883 |
Strand | - |
Start bp | 104886 |
End bp | 106469 |
Gene Length | 1584 bp |
Protein Length | 527 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 643580866 |
Product | Nitrite reductase (cytochrome; ammonia-forming) |
Protein accession | YP_002478679 |
Protein GI | 220903367 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG3303] Formate-dependent nitrite reductase, periplasmic cytochrome c552 subunit |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.304883 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAATAAGC GAATTGTGAC CACGGCCCTG GCGTTGGCCA CGCTGCTGGG CGTAGCTTTG CTCAGCGGCT GTCAGGATGT TTCCACAGAG CTGAAGGCCC CCAAGTACAA AACGGGCATT GCTGAAACGG AAACCAAGAT GTCGGCCTTC AAGGGCCAGT TTCCGCAGCA GTATGCTTCG TACATGAAAA ATAACGAAGA CAGGATCATG ACCGACTATA AAGGCTCGGT TCCCTACCAC AAGAATGACA ATGTGAATCC CCTGCCCAAG GGCTTCAAAC ATGCCCAGCC CTACCTGAAA AACCTCTGGC TGGGCTATCC GTTCATGTAT GAATATAATG AAACGCGCGG CCACACCTAT GCCATTGACG ACTTCCTGAA TATTGACCGC ATCAACCGTT TCGCGGCCGA CGGTAAGGGC AACCTGCCAG CCACCTGCTG GAACTGCAAA ACCCCCAAAA TGATGGAATG GGTGTCCCAG TACGGCGACA AGTTCTGGTC TATGGATGTC AACGAGTTCC GCGCCAAAGA CAAGATCAAC GCGCATGATG AAACCATCGG CTGCGCCAAC TGTCACGATC CGGCCACTAT GGAACTGCGC CTCTACTCCG AACCGCTCAA GGACTGGCTC AAGCGCAGCG GCAAGGACTG GCAGAAGATG AGCCGCAACG AAAAGCGCAC CCTGGTCTGC GCCCAGTGCC ACGTGGAATA CTATTTTACC CACAAGGACA ACGGCCCGGC CGCAAAGCCC GTATTCCCCT GGGATAACGG CTTCAACCCC GAAGACATGT ACCAGTATTA CAAGGGTCAC GGAGCCAAGG GCCCCGACGG CAAGCCCGGT CCCTTTGTGG ACTGGGTACA CGCTGCCTCC AAGGTTCCCA TGATCAAGAT GCAGCACCCC GAATACGAAA CCTTCCAGGA TGGTCCCCAC GGCGCGGCCG GCGTTTCCTG CGCGGACTGC CACATGCAGT ACGTGCGTGA AGACGGCAAA AAGATCTCCA GCCACTGGAT GACCTCGCCC ATGAAGGATC CTGAAATGCG CGCCTGCCGC CAATGCCACG CCGACAAGAC CGGCGAATAC CTGCGCCAGC GCGTGCTGTA CACCCAGCAG AAGACCTTTG ACCAGCTGCT CAAGGCTCAG GAAATGTCCG TCAAGGCTCA CGAGGCCGTG CGGCTTGCCA ATGCCTATGA AGGCCACCGC GCCGCCAACT ACGAAGCCCT TATGGCCGAA GCACGCGAAA TGGTACGCAA GGGCCAGCTG TTCTGGGACT ACGTTTCAGC TGAAAACAGC GTGGGCTTCC ACAACCCGGC CAAGGCTCTT GATACGCTCA TGACCAGTAT GGAGTGCAGC CAGAAGGCCG TTGACCTGGC CACCGAGGCC ACTGACTTCG GCATCGCCCC CGCCCTTGCC GGAGACATCA AGAAGCTGGT TCCGCCCATT CTTACGCTGA GCCGCAAGCT CCAGCAGGAC CCGGAATTCC TCAAGCAGAA CCCCTGGACC AGACTGCTGC CCGCTCTGCC CAAGGCCGAA CAGGTATGGG AAGGTCAGGA CCGCCTGACC TCGCAGGCCG GTCAGGACAA ATAA
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Protein sequence | MNKRIVTTAL ALATLLGVAL LSGCQDVSTE LKAPKYKTGI AETETKMSAF KGQFPQQYAS YMKNNEDRIM TDYKGSVPYH KNDNVNPLPK GFKHAQPYLK NLWLGYPFMY EYNETRGHTY AIDDFLNIDR INRFAADGKG NLPATCWNCK TPKMMEWVSQ YGDKFWSMDV NEFRAKDKIN AHDETIGCAN CHDPATMELR LYSEPLKDWL KRSGKDWQKM SRNEKRTLVC AQCHVEYYFT HKDNGPAAKP VFPWDNGFNP EDMYQYYKGH GAKGPDGKPG PFVDWVHAAS KVPMIKMQHP EYETFQDGPH GAAGVSCADC HMQYVREDGK KISSHWMTSP MKDPEMRACR QCHADKTGEY LRQRVLYTQQ KTFDQLLKAQ EMSVKAHEAV RLANAYEGHR AANYEALMAE AREMVRKGQL FWDYVSAENS VGFHNPAKAL DTLMTSMECS QKAVDLATEA TDFGIAPALA GDIKKLVPPI LTLSRKLQQD PEFLKQNPWT RLLPALPKAE QVWEGQDRLT SQAGQDK
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