Gene Ddes_0070 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDdes_0070 
Symbol 
ID7283721 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 
KingdomBacteria 
Replicon accessionNC_011883 
Strand- 
Start bp90458 
End bp91528 
Gene Length1071 bp 
Protein Length356 aa 
Translation table11 
GC content66% 
IMG OID643580855 
Productthiamine-monophosphate kinase 
Protein accessionYP_002478668 
Protein GI220903356 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0611] Thiamine monophosphate kinase 
TIGRFAM ID[TIGR01379] thiamine-monophosphate kinase 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGTCCCGT CCCCTGTTCC GGGCGGCTCT GCCGCCACCA GCGCGGTCCC ACTTTCAGAA 
GATCGCATCC TGGCCTGCCT GGCGGGATAC TTTCCGCAGA CGCACCCTTC CCTGCTGCTT 
GGCCGTGGCG ATGACTGCGC TGTGCTCAAG GCGGAAAAGC CCCTTTGCGT GAGCAGCGAC 
CTTTTTCTGG AAGACATCCA CTTCCGGCGA AACTACTTTA CCCCCGAAGA CACGGGCTAC 
AAGGCGCTGG CCGTCAACGT GAGCGATCTT GCGGGCTGCG GCGCCCGCCC CCTGGCCTTT 
ACCCTCTGCC TGGGCTTGCC CGCATGGGTG GACATGGACT GGCTCAACAG GTTTTTCAGC 
GGCATGGCCG AACTGGCGGG CAAGCACCGC ATCGCCCTGG CTGGCGGCGA CCTGTCCCGC 
AGCACAAGCC TGCACATCTC CATCACTGTC TGGGGCGAAG CGGCGGAACC CGGCAGTTTT 
CTGGCGCGCG GAGGCAGCAT GCCGGGCGAC ATTCTTTTTC TTGTGGGGCC GCTGGGTCTT 
GCCCGCGCAG GCCTTGCCCT GCTTGAGGAG CAGGGCCGCG AAGCCCTGCA CCACTGGCCC 
GCCGTCTGCG CCGCGCATCT GCGCCCCGTT CCCCAGGTGG ATGCGGGACT CATGCTGTCC 
AGAGCAGGGT ACAATGCCCG GCCCCCGGCC CTTATGGACC TTTCGGACGG GATACTGCGC 
GACCTGCCCC GCCTGCTGGG CCTCAGCGGC GAACTGAGCG CCACCTGCCC GGAGAAATGC 
ACGGGCCTTG GAGCCGAAAT CGTGCTGCCG CGAGGCCGCC TGCACCCGGA AGTACTGCAC 
TACGCGGCGG CTACGGGTAA AAATCCTGTT TATGAGGCCC TGCTCGGCGG CGAGGATTAC 
GCCCTGCTCG GCTCATGCGC CCCCGACATG CTGCCGCCCC TGCATGCGGC CATACCGGGG 
CTGTTCAGCA TCGGCGTCGT CACCTCCGGC GGCGGCATTG TATGCAATAA CGAACCGCTG 
GAAAAACTCG GCGGCGGTTT TGACCACTTT GATGCCGGGC AGGACGCCTG A
 
Protein sequence
MVPSPVPGGS AATSAVPLSE DRILACLAGY FPQTHPSLLL GRGDDCAVLK AEKPLCVSSD 
LFLEDIHFRR NYFTPEDTGY KALAVNVSDL AGCGARPLAF TLCLGLPAWV DMDWLNRFFS 
GMAELAGKHR IALAGGDLSR STSLHISITV WGEAAEPGSF LARGGSMPGD ILFLVGPLGL 
ARAGLALLEE QGREALHHWP AVCAAHLRPV PQVDAGLMLS RAGYNARPPA LMDLSDGILR 
DLPRLLGLSG ELSATCPEKC TGLGAEIVLP RGRLHPEVLH YAAATGKNPV YEALLGGEDY 
ALLGSCAPDM LPPLHAAIPG LFSIGVVTSG GGIVCNNEPL EKLGGGFDHF DAGQDA