Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ddes_0028 |
Symbol | |
ID | 7283679 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 |
Kingdom | Bacteria |
Replicon accession | NC_011883 |
Strand | - |
Start bp | 39141 |
End bp | 40895 |
Gene Length | 1755 bp |
Protein Length | 584 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 643580813 |
Product | CobB/CobQ domain protein glutamine amidotransferase |
Protein accession | YP_002478626 |
Protein GI | 220903314 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG1797] Cobyrinic acid a,c-diamide synthase |
TIGRFAM ID | [TIGR00379] cobyrinic acid a,c-diamide synthase |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.430585 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCACACCG AACAGCCGCG CATTCCCGGC ATCATCATCG CCGGCACAGG CAGCAATACG GGCAAGACCA CGGCCACCCT GGCCCTGCTT TGCGCCCTGG CTGCCCGCGG CATTCCCGTG CGCGCCGCCA AAACCGGTCC CGACTATATA GACGCCGCTT TTCACGCCGC CATCACAGGT CTGCCCGCCG CCAATCTTGA CACGTGGATG TGTCGCGAAA CTCTGCCCAA AGCCGGAGAA AGCCCGCTGA CTTCGAGAAA ACGCCTGCCC AGGGGTCTGC GCAGCGTCTT TGCCCGCATG GCCGGGCCTG AAAACTCTCA AAAACATTCC TTCGGCACGC CCGCCCCCGC CCTTCTTGTG GTTGAAGGAG CCATGGGCCT GTATGACGGC GGACATGGCG GCGCGGGCAG CACGGCACAG CTGGCGGCCC TGCTGGACCT GCCCATTCTG CTCATATGCA GTGCGGCAGG GCTTGGGCAG TCAGTGGCGC CGCTGGTGGA AGGCTATGTC CGCCACAAGC CGCACTGGTT GTCCGTCCAC GGTCCAACCC CGCGCTTTCT GGGCGTTATC TGCACACATG TGGGCAGTCC GCGCCATGCA GAAATTATTG AAGATGCCCT GAAGCCGCTG CAAAAAACAG ACGGCCTACC CCTGCTGGGG CTGTTGCCCC GCGCTGGAGC ACCTGCCCTC AAGTCCCGCC ATCTTGGCCT TGTGGAAGCA CGGGAGGCCC TGTCCGCCCT GGATCGCCCC GCGCTGGCAC ACTGGTTTGA AGAAAATTGC CGCCTGGATG CCCTGCTGCG TCTGGTGGGA ACAGCAGACA GTCTGCACAA TACGCCAGAT GCGGCCGCTT TTTTTATGGC AAATGCGGAG AAAGGCAGCC CTGCCACAGA AGAAACAGCC TGGGCCGCGC GCTTTTTTAT GCCGCGCCCG CCCGGTGGCC GGCATGTTCT TCAAAATGCT GTTGACGGTG CGGGAATGGG GCAGCACGAC GCTCCCGCTG CCCCCCAAAA AACTTCCACC CCCAAACGCA CCCGCCGCCC CCGTGTAGGC ATGGCCTGGG ATGCGGCCTT CAGTTTCTGC TATGCCGACC TGCCCCCCCT GCTCGCAGAA CTGGGCGCAG AGCTTGTTTT CTTTTCACCG CTGCGCGATG CCGCGCCGCC GCCCGGCTGT TCCGCCCTGT ACTTTCCCGG CGGCTACCCG GAACTGCATG CCCCGCAACT GTCAACCAAC GTCCGCATGC TTGACGCCCT GCGCGCACTG GCCCGGAACG GCCTTCCCAT ATATGGTGAG TGCGGGGGCT ACATCTACCT TATGCACTCC CTGCGGCTGA AGACACATGA CGGGGCGGAC AGAGCAACAG AACATCCCAT GGCCGGTCTT TTACCCATAC ACTGCACCCT GGGGCAGGAG CGTGCAGCCC TGGGCTACCG GGCCGCTCTG GCCCTGCCGG GCTGGCCGCA AGACCGGCCC CAGGACCGCG CCCAAACCGG GGCAGGCGCA GAATGCAGCC GCCCTGCCCC CATCTGGGTA CGGGGACACG AATTTCACTA TGCCCGTGAA GACGATTCCC CTTTGCCCGC ACACTGCGCG CCATTGTGGA ACCTGTATGA CAGCAAGGGA ATTTTTTTAC GGCAGGAGGG CTGCCGCCAC GGCTCCGTGG CCGGAACATG GCTGCACTGC TATCCTGAGG GATCCCGACG CTTCTGGCGT ACATGGCTCG AAGCAGCGGT AAAAAACAAT GGCAGAACGA TGTAA
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Protein sequence | MHTEQPRIPG IIIAGTGSNT GKTTATLALL CALAARGIPV RAAKTGPDYI DAAFHAAITG LPAANLDTWM CRETLPKAGE SPLTSRKRLP RGLRSVFARM AGPENSQKHS FGTPAPALLV VEGAMGLYDG GHGGAGSTAQ LAALLDLPIL LICSAAGLGQ SVAPLVEGYV RHKPHWLSVH GPTPRFLGVI CTHVGSPRHA EIIEDALKPL QKTDGLPLLG LLPRAGAPAL KSRHLGLVEA REALSALDRP ALAHWFEENC RLDALLRLVG TADSLHNTPD AAAFFMANAE KGSPATEETA WAARFFMPRP PGGRHVLQNA VDGAGMGQHD APAAPQKTST PKRTRRPRVG MAWDAAFSFC YADLPPLLAE LGAELVFFSP LRDAAPPPGC SALYFPGGYP ELHAPQLSTN VRMLDALRAL ARNGLPIYGE CGGYIYLMHS LRLKTHDGAD RATEHPMAGL LPIHCTLGQE RAALGYRAAL ALPGWPQDRP QDRAQTGAGA ECSRPAPIWV RGHEFHYARE DDSPLPAHCA PLWNLYDSKG IFLRQEGCRH GSVAGTWLHC YPEGSRRFWR TWLEAAVKNN GRTM
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