Gene Ddes_0028 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDdes_0028 
Symbol 
ID7283679 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 
KingdomBacteria 
Replicon accessionNC_011883 
Strand
Start bp39141 
End bp40895 
Gene Length1755 bp 
Protein Length584 aa 
Translation table11 
GC content63% 
IMG OID643580813 
ProductCobB/CobQ domain protein glutamine amidotransferase 
Protein accessionYP_002478626 
Protein GI220903314 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG1797] Cobyrinic acid a,c-diamide synthase 
TIGRFAM ID[TIGR00379] cobyrinic acid a,c-diamide synthase 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.430585 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCACACCG AACAGCCGCG CATTCCCGGC ATCATCATCG CCGGCACAGG CAGCAATACG 
GGCAAGACCA CGGCCACCCT GGCCCTGCTT TGCGCCCTGG CTGCCCGCGG CATTCCCGTG
CGCGCCGCCA AAACCGGTCC CGACTATATA GACGCCGCTT TTCACGCCGC CATCACAGGT
CTGCCCGCCG CCAATCTTGA CACGTGGATG TGTCGCGAAA CTCTGCCCAA AGCCGGAGAA
AGCCCGCTGA CTTCGAGAAA ACGCCTGCCC AGGGGTCTGC GCAGCGTCTT TGCCCGCATG
GCCGGGCCTG AAAACTCTCA AAAACATTCC TTCGGCACGC CCGCCCCCGC CCTTCTTGTG
GTTGAAGGAG CCATGGGCCT GTATGACGGC GGACATGGCG GCGCGGGCAG CACGGCACAG
CTGGCGGCCC TGCTGGACCT GCCCATTCTG CTCATATGCA GTGCGGCAGG GCTTGGGCAG
TCAGTGGCGC CGCTGGTGGA AGGCTATGTC CGCCACAAGC CGCACTGGTT GTCCGTCCAC
GGTCCAACCC CGCGCTTTCT GGGCGTTATC TGCACACATG TGGGCAGTCC GCGCCATGCA
GAAATTATTG AAGATGCCCT GAAGCCGCTG CAAAAAACAG ACGGCCTACC CCTGCTGGGG
CTGTTGCCCC GCGCTGGAGC ACCTGCCCTC AAGTCCCGCC ATCTTGGCCT TGTGGAAGCA
CGGGAGGCCC TGTCCGCCCT GGATCGCCCC GCGCTGGCAC ACTGGTTTGA AGAAAATTGC
CGCCTGGATG CCCTGCTGCG TCTGGTGGGA ACAGCAGACA GTCTGCACAA TACGCCAGAT
GCGGCCGCTT TTTTTATGGC AAATGCGGAG AAAGGCAGCC CTGCCACAGA AGAAACAGCC
TGGGCCGCGC GCTTTTTTAT GCCGCGCCCG CCCGGTGGCC GGCATGTTCT TCAAAATGCT
GTTGACGGTG CGGGAATGGG GCAGCACGAC GCTCCCGCTG CCCCCCAAAA AACTTCCACC
CCCAAACGCA CCCGCCGCCC CCGTGTAGGC ATGGCCTGGG ATGCGGCCTT CAGTTTCTGC
TATGCCGACC TGCCCCCCCT GCTCGCAGAA CTGGGCGCAG AGCTTGTTTT CTTTTCACCG
CTGCGCGATG CCGCGCCGCC GCCCGGCTGT TCCGCCCTGT ACTTTCCCGG CGGCTACCCG
GAACTGCATG CCCCGCAACT GTCAACCAAC GTCCGCATGC TTGACGCCCT GCGCGCACTG
GCCCGGAACG GCCTTCCCAT ATATGGTGAG TGCGGGGGCT ACATCTACCT TATGCACTCC
CTGCGGCTGA AGACACATGA CGGGGCGGAC AGAGCAACAG AACATCCCAT GGCCGGTCTT
TTACCCATAC ACTGCACCCT GGGGCAGGAG CGTGCAGCCC TGGGCTACCG GGCCGCTCTG
GCCCTGCCGG GCTGGCCGCA AGACCGGCCC CAGGACCGCG CCCAAACCGG GGCAGGCGCA
GAATGCAGCC GCCCTGCCCC CATCTGGGTA CGGGGACACG AATTTCACTA TGCCCGTGAA
GACGATTCCC CTTTGCCCGC ACACTGCGCG CCATTGTGGA ACCTGTATGA CAGCAAGGGA
ATTTTTTTAC GGCAGGAGGG CTGCCGCCAC GGCTCCGTGG CCGGAACATG GCTGCACTGC
TATCCTGAGG GATCCCGACG CTTCTGGCGT ACATGGCTCG AAGCAGCGGT AAAAAACAAT
GGCAGAACGA TGTAA
 
Protein sequence
MHTEQPRIPG IIIAGTGSNT GKTTATLALL CALAARGIPV RAAKTGPDYI DAAFHAAITG 
LPAANLDTWM CRETLPKAGE SPLTSRKRLP RGLRSVFARM AGPENSQKHS FGTPAPALLV
VEGAMGLYDG GHGGAGSTAQ LAALLDLPIL LICSAAGLGQ SVAPLVEGYV RHKPHWLSVH
GPTPRFLGVI CTHVGSPRHA EIIEDALKPL QKTDGLPLLG LLPRAGAPAL KSRHLGLVEA
REALSALDRP ALAHWFEENC RLDALLRLVG TADSLHNTPD AAAFFMANAE KGSPATEETA
WAARFFMPRP PGGRHVLQNA VDGAGMGQHD APAAPQKTST PKRTRRPRVG MAWDAAFSFC
YADLPPLLAE LGAELVFFSP LRDAAPPPGC SALYFPGGYP ELHAPQLSTN VRMLDALRAL
ARNGLPIYGE CGGYIYLMHS LRLKTHDGAD RATEHPMAGL LPIHCTLGQE RAALGYRAAL
ALPGWPQDRP QDRAQTGAGA ECSRPAPIWV RGHEFHYARE DDSPLPAHCA PLWNLYDSKG
IFLRQEGCRH GSVAGTWLHC YPEGSRRFWR TWLEAAVKNN GRTM