Gene Ddes_0025 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDdes_0025 
Symbol 
ID7283676 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 
KingdomBacteria 
Replicon accessionNC_011883 
Strand
Start bp36086 
End bp37102 
Gene Length1017 bp 
Protein Length338 aa 
Translation table11 
GC content59% 
IMG OID643580810 
ProductNAD-dependent epimerase/dehydratase 
Protein accessionYP_002478623 
Protein GI220903311 
COG category[M] Cell wall/membrane/envelope biogenesis
[G] Carbohydrate transport and metabolism 
COG ID[COG0451] Nucleoside-diphosphate-sugar epimerases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.730827 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCACGTTC TGGTAACCGG CGCGGCAGGA TTCATCGGCT ATCATCTGGC TGCACGGCTG 
CTGGCCGACG GGCACAGCGT GGTGGGCATT GACAATTGCA ACGATTACTA CGACGTGCAG
TTGAAAAAAG ACCGCCTGGC GCAACTGGCC GCCTTGCCCC AGGCCTCGTG CTTTCGTTTC
GAACCGCTGG ACCTGGCCGA CGGGCCGGGC ATGTCCGCCC TTTTCGCGCG CGAAGGTTTC
AGCCATGTTG TGAATCTGGC CGCGCAGGCC GGGGTGCGCT ACAGCCTCGT CAATCCCGAA
TCCTATCTCA GCTCCAACCT GACAGGCTTT GGTCATGTGC TTGAAGGCTG CCGCCACAAC
AAGGTCGGCC ACCTGCTTTT TGCCTCATCT TCTTCGGTCT ACGGGCTCAA CGCGGCCCAA
CCCTACTCTG TACGGCACAA TGTGGACCAT CCGGTTAGCC TGTATGCGGC CACCAAAAAA
AGCAACGAGC TTATGGCCCA TTCCTACAGC CATCTCTACG GCATCCCCTG CACCGGGCTG
CGTTTCTTCA CCGTATACGG CCCGTGGGGC AGGCCGGACA TGGCCCTGCA CCTTTTTACC
ACCGCCATTG TGCGCGGCGA ACCCATCAAG GTCTTTAACG AAGGCCGCAT GCGCCGCGAC
TTCACCTATA TTGACGACAT AGTGGAAGGC ATTGTACGCC TGCTGCCCCT GGCCCCCGGC
CCAGACCCGG CCTTTGACCC GGCAGCGCCC GACCCGGCTT CCAGTTCCGC GCCCTGGCGC
ATTTATAATA TCGGCAATAA CAATACGGTG GAACTCAACG ATTTTATCGC CACCCTTGAA
GACGCGCTGG GCATGAAAGC CCGCAAGGAC ATGCTGCCCA TGCAGCCCGG CGACGTAAAG
GCCACCTGGG CCGACATCAA CGACCTCACC GCCCTTACGG GTTTTGCCCC GTCGACGCCC
TTGCGCGAGG GCATCGCCCG CTTTGTGGAA TGGTATAAAG AGTATTATAA AATATGA
 
Protein sequence
MHVLVTGAAG FIGYHLAARL LADGHSVVGI DNCNDYYDVQ LKKDRLAQLA ALPQASCFRF 
EPLDLADGPG MSALFAREGF SHVVNLAAQA GVRYSLVNPE SYLSSNLTGF GHVLEGCRHN
KVGHLLFASS SSVYGLNAAQ PYSVRHNVDH PVSLYAATKK SNELMAHSYS HLYGIPCTGL
RFFTVYGPWG RPDMALHLFT TAIVRGEPIK VFNEGRMRRD FTYIDDIVEG IVRLLPLAPG
PDPAFDPAAP DPASSSAPWR IYNIGNNNTV ELNDFIATLE DALGMKARKD MLPMQPGDVK
ATWADINDLT ALTGFAPSTP LREGIARFVE WYKEYYKI