| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cyan7425_5438 |
|---|
| Symbol | |
|---|
| ID | 7280397 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cyanothece sp. PCC 7425 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011880 |
|---|
| Strand | + |
|---|
| Start bp | 173419 |
|---|
| End bp | 174420 |
|---|
| Gene Length | 1002 bp |
|---|
| Protein Length | 333 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 51% |
|---|
| IMG OID | 643580581 |
|---|
| Product | transcriptional regulator, AraC family |
|---|
| Protein accession | YP_002478394 |
|---|
| Protein GI | 219883232 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG2207] AraC-type DNA-binding domain-containing proteins |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCAAAATT CCGTCTCGGT TAAACTCGTG CAAGCAATTT TAGAGGCCGC CGCCCACTGT
GGTCTGGATG TCAATGATCT CCTGACTGCT CTGAGGCTGG CTCCAGGCTG TTTAGAGGAT
GTGGATGGGC GGATTCCGCA CGAGCAGTTC TGTGCCCTCT GGCAATTGAT TACTCAGCGA
TCTAAAAGCG GCTGCATTGG CTTGCAGATG GCAACCGCTG CAAAACCAAA AACCTGGGAT
GTATTGGGTT ACGCGATGCA TAGTAGTGCC AATTTGGGGG AAGCATTTGA GCGGTTAGTG
CGTTACTCAC GTCTCAGGCA CACAGGAGCC GAATTTACTT TCGAGGTTCG GAGAGATATC
GCCCGAATTA CGATGGCAAT TCCCAACACA CTTCTGCCGC CCAATGATGC GATGGGTGAA
TGGGTGGGAG CCAACTTTGT CCTGTTGAGC CGTCGATTAA CAGGGCTGGA TATAGTACCG
TTACAGATGG GTTTTCAGCA TCCTAAACCA GAGGACGTAT CAGCTTACCA TCGCCTTTTT
CGGTCTCCTT TAGCGTTTGA TCACCCTGTG AACGAAATGA GGTTGGATGC AGCACTGATC
CAGAACCCCC TGGCACAAGC CGATCCGGGT CTCTCCTCTA TTCTCGATCG CCATGCCGAA
GAACTGTTGG CTCGGCTGCC ACAGTCTGAA AGCTTGCTTG ATAGTGTCAA TCGATTGCTA
AGTCAGGCAT TGCGGGGAGG TGATCCGAGC TTAGTGGCGA TCGCTCAACA ACTTGGCTAT
ACCCCCCGCA CCCTCCAACG GAAGCTACAA GAAGCAGGCA CGTCCTACCA TTCACTGCTA
GACGAAATGA GACGAGAGCT TTCTATCTAC TATTTGCGAG AAGCGCAAAT TGCGATAAGT
GAGATCGCTT TTTTATTGGG GTTTTCGGAA ACCAGTGCAT TTCATCGCGC GTTTCGACGT
TGGATGGGCG TTTCCCCTGG TGATTTTCGC CGCAGTGCCT AA
|
|---|
| Protein sequence | MQNSVSVKLV QAILEAAAHC GLDVNDLLTA LRLAPGCLED VDGRIPHEQF CALWQLITQR
SKSGCIGLQM ATAAKPKTWD VLGYAMHSSA NLGEAFERLV RYSRLRHTGA EFTFEVRRDI
ARITMAIPNT LLPPNDAMGE WVGANFVLLS RRLTGLDIVP LQMGFQHPKP EDVSAYHRLF
RSPLAFDHPV NEMRLDAALI QNPLAQADPG LSSILDRHAE ELLARLPQSE SLLDSVNRLL
SQALRGGDPS LVAIAQQLGY TPRTLQRKLQ EAGTSYHSLL DEMRRELSIY YLREAQIAIS
EIAFLLGFSE TSAFHRAFRR WMGVSPGDFR RSA
|
|---|
| |