| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cyan7425_5390 |
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| Symbol | |
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| ID | 7280351 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cyanothece sp. PCC 7425 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011880 |
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| Strand | + |
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| Start bp | 110909 |
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| End bp | 115906 |
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| Gene Length | 4998 bp |
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| Protein Length | 1665 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 643580535 |
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| Product | conjugative relaxase domain protein |
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| Protein accession | YP_002478348 |
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| Protein GI | 219883186 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0507] ATP-dependent exoDNAse (exonuclease V), alpha subunit - helicase superfamily I member |
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| TIGRFAM ID | [TIGR02686] conjugative relaxase domain, TrwC/TraI family |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAGAAGTC TCCACACAAT TACGTCAGGT CATCAAGAAA AAGAAGACTA TTACACCCAG
GATGAATCGC TCTGCGATGG GCAAGCGGAT TACTACGGTC AGTCAGCCCA GTCAACCACG
GAGTCTTCTG TTCAATCCCT TACTCAAGCC CTCTGGTACG GCAAAGGTGC AGCTCGTCTG
GGATTGGTCG GGATCGTCCA GCGGCAGGAC TTCCAGTCCG TGTTTTATGG CGACCAACCG
GGCGGCCAGG AACGAATTCG GGGTGAGCGC CCTAACCCAG ACACAAAGGA ACGGTTGGCT
CACGACCTCA CCCTCTCAGC CCCTAAATCC GTTTCCATGA CCCTGCACCT GGGTGGAGAC
GAACGGCTTT TTCAAGCTCA TTTAGAAGCC GTTCAGGAAA CCTTAGACCT GGTGGAATCA
AGGTATGCCC AGACTCGAGT TCAGATCGAC GGTGAACGTC GAGTGATGCG GACGGGTCAT
CTCATTGCCG CGATCCTCCC CCACCACACT TCTCGAGAAG GAGACCTGCA ACTCCACTGC
CACTGTGTGC TCATGAACGG AACGTTCTGC CCGGATGGGA ACTGGCGATC GCTTTGGCAC
GAGGGGATGG TGAATGCCGA ATGGTTGGGC AGTTACTACC GGCTGCGTCT GGCCCAAAAG
GTGCAAGACC TCGGATACGC CATTGATGAA ACCCGACTGG AGCAGGGGGG AGCATTTGAG
ATTCAGGGAT ATAGTCGGGA GGCGATCGAA GCATTCAGTA AGCGATCCAG GCAGATTGTG
GCGTATCTGG AACAGCACAG ACAATGCGTT AATTCGGCCA CGCGAGATGG AGCCGTTCTG
ACAACCCGCA AAGCAAAACA GATGGAAGGA ACCCTGGAGG ACTATCAGGC TCGCTGGCGG
CTTGAAGCGA ACGTTTTGGG AATTAATGCT GTCCTCCCTC AAGCCCAACC TGTAACGCTC
TATGGCTATG GGACCGCCCG GGAGGAATTG GCCAGCGCCA TTCGACACTT GTCAGAACGA
TCCGTCAGCT TCAGCCGGGA AGACCTTTAT AGCTCTGTCT TTGACCGCAT TCAGGCTTTT
GACATTGCTC AGCTAGACGC AGTGATCGCT GAGCAGAAAG ACCTGATTCC GGTTCAGGGC
GGACGCTTTA CCACAGTTAC TGCCCTGGAG CGAGAAATTA CGACCCTTCG GGACTGGATG
CAGGGACAAG GAAAGACCAC TCCCCTGATG GACGAAACCA CTGCCCAGGC ATTACTTGAG
CGGTCGGCTC TGAATTCTGG ACAGGCCACC GCGATCGCCG GAATCGTCAG CGCAGGGGAT
CAGCACCTGA TCCTGCACGG CTTATCGGGC GTTGGTAAAA CAACTGCACT GCGAGAATTG
AAGCGGTTGA TCCAGGAATC GGATTCAAAA CCGGACATCA GGGGGTATAG CCCGACGATC
GCTGCTGCTG CAACCCTTGC CCAGTCACTC CAGATCTCAA CCAGCACTGT TGAAAGTCTG
GTGCTCAAAC CTCCTGAACC CCTGGCTGAT CAACTCTGGA TCATTGACGA AGCTGGCATG
ATCAGTGCCC GGCAGATGGC CATCATTCTG AAGAAAGCCA ATGCTGTTGG GGCAAGGCTG
CTCCTGGTGG GCGATCCTCG ACAGAACCCT GCCATTGAAG CTGGGAGTCC GATGCGGAGC
TTAATTCAGC ACGGGGCCAC GACGTTTAGC CTTCGGGAGA TTATCCGCCA GCAAAATGCT
GTCCAGCGAC GGGCCGTCGA ACTGATGGCT ACAGGACATC CGGTCCATGC GCTCAGTCTG
CTCACTGAAC ACGGGTATGT GCAGGAGATC AGCGATCCCC AAGCACGGAG TCAGGCGATC
GCCCACCAGT GGTTAACCCT TTCAGATAGT GAGCGGCAAA ACACGCTCAT TGTCACAGGC
ACAAACGCGG AACGACGGGC AATCCATCAG CAGTTGCGGC GGGGACTGCG GGATGAGGAA
GGACTGGGGG AGGATCAGCT GTTCCGCCAA CTGATTAACC GCCAGTTGAC CACCGAGCAG
AAATTGCGGT GGGAGAACTA TCGGGTTGGA GATTATATCC GGTTGCACCG GAACTATGAA
AGTACGCTCC TGGGGAAAGG TCGCCTCTAT CAAGTCGTTG GAATACGGGA CAGGCAGTTA
CTGGTTGAAA GTGAAGGTGG CCGGCTCCTC TGGTTTGACC CAGCCCGGTA TCGAGATAAG
GAGGTGTTTA AGACCGGTGA AATCGCGATC GCCCCTGGAG AGCAGCTGCG CTGGACATTG
ACCGATCGCA AGACAGGGCA GATCAATGGC TCTCAGGTCT CAGTCAGGGA GATCAACGAC
GATCATCTAA CCGTTGTAGA TGACCAGGGA CAGGAATGGA GGATTAATGG TCGGTTACCT
CTGACCCTGG ACTATGCTCA TGTCACCACA GCTTATTCTG CCCAGGGACT GACTGCTGAG
CGAGTGATTG TGTCTGCAAC GAACAATCCA ACCTCTGCCC AAGAACCCTT TTATGTCAAG
ATTTCTCGCC AGGTTAGAGA GCTTCAAATT TATGTTGAAG ACCTGGAGGG ATTGCGCGAG
TGGGTGGGGC GCAGTGTCGC CCAGATGAAT CCTTTAGAAC TTATCGGAGG GCATGATGTC
AAACGAGAAC GCCAATTTGG AGCAACTGGT GCTCACGATG AACCAGAAGC TGGACAGCCT
GATCGCCCAG AACAGAATTT ATCAGGAGGA GAACACAGCC TTAAAGTCGA TGCTGGACTT
GAGCCTCAGT ACCGTCCCCC TCACCATGCG ACAGGAACTT CAGACGTTTC TAGACCAGTT
CCGCGAGGCT CTGGAGAAGC GGAAGCCTTC GGAGATGTCC GATGCGATTC ATCAACTGGC
TTTGGCAGTG AAGGGATTGA AGGACCAGAT CGACCGTTCA GCATTGACCG ATACCCAGAT
CAGCTTGTCC CTCAACCAGA CCCTAGCCGA AATCAATGCG TTAACCCATT GCTTATCCAA
CAGCGATTTG ATCAAATTGC TCAGCAAATG GGAGCAGTCT TCCCCGGAAA CCCTGAAACT
TCCTTAAACG CTACCTTTGG GCAATCTCAT TACCGGGGCT TGGCAGAGTT CGCTCAGGAA
CTGGAGTATC TCGGTGAAGA AGACCTGTGC CAGACCCTGC AAGACATTAC CCACGCCCTG
GTGGAGGTAG AACGCTGTCT GGAACGATCG CTGCAACAGG TCAAACTGGA CACGATCACT
GATGCTCTCC AGTCGTGGCG CTCAGAACAA GCTCTCTCGG AAGCGATCGC CCAAATCGCG
ACTGTCCAGG CTCAGGCAGA AGAGCCAGAT TCTTTAATCC TGGGAACGGT CCTTCAGGAG
GTGAGGAAAC TTCCCTACCG TCGGGAAGAG GTCGATCACC TGGTTGAACG GGTCGAGGAG
TGGCAGGCCG AGCAGGATCT CTCTGCTGTT TTGGAGCAAC TGGGCAGGAC GATCAATGAA
CTCAAACCGT CCTTCTTTTC ACCGGGCTAC CAGGCGATGG CTGAACTGGC TGAGGCCGTG
GGCGATCGTC CTGCCGAAGC TGTCATTAGG GAGCACCTGC AAGCCCTTCA GGACGCTACT
CTACAGATCC AGCAGAGGTT ACTCCAGAAT CCAGGATTGG AGCAACTGGC GGTTGCTGTG
AGATCTTTGA GAGAAAACCC TGTTATTGCC GAGGGAGCTG CAGCAGAGCC ACTCCAGCAG
GTGGCTGAAC ACCTGACAGC CTATGGACTG AATCCCACTC CACCACCGCA GAAACTCCAA
CCCTTCTGGC AACCCCAGTA CCTGGAGGAG CCACCCGCAG GCTTTGACCC CGTCCACTGG
CAGGAATTCC AACGCAGTGC GATCCACCCC GACCTAATTG TGGCTAACGC TGAGAGTATC
GATGGCTGGA GAGTGTATGA ACGATTGCTA TCCGAGAAAT TGGCAGAAAT GGGCTCAGGG
CAATACGTCA CCGCTGCCAT GGCCAGGGAA ATGCGACGTT ACGAGCAGGT TGCTGAGGGA
GGCTGGTGGG GCAAGGCTGG AATTGATCCT CAGTCACTGC CAGGTCTGCA ACCCGGTGAG
CAACCTACTC TCAGCACCTG GGGTTGTTTC AAACCTGATC ATCCCCGCAT GGATGTCAGC
AAGAGCGATC GCACAGGGCA ACCCAAAACC ATCAAGTATG AGCATCCCGT TGGCGTCCAG
CGAGGTCTTT ACCTACCGAT TGTTCCGGAT AGCTTGGCAA AGCGAATTTA TCAGAAATAT
CAGATTCAGC CCACCTCAAC TGAGCAGCAA AGCGGCTTCT GGTTTGTCGT GCTGCACTAT
AACCTGCCGA TCACAATTAC AGAGGGGGTG AAGAAAACCT GGGCGAGCCT CAGTCAGGGG
GAGGTGACGA TCGGGGTCTC CGGCGTAAAT GGTCTTTACC GCACAACGGA TGTAGGGGGT
CATCGGCTTC CCCAGCGGCA ACTGCACCCG GACATTGCCA TTTTTGTCAC GCCAGGGCGG
GAGTTCCGGT TTGCCTACGA CCACGACACT AAACCTGCCA CCGTCTACAA TGTACAGCGC
GATCGCGTGC GGGGGATTGA GCTACTGGAG GCGCGGGGCT GTCTCTGCAA GATTGTGCAA
TGGTCAGGGG ATAAGGGGCT GGATGATCTG ATTGCTCACC AGGGGGCGAA CGCTTACACA
AGGGCACAAC TTCAGGCCAT TTCGGCTGAG CCAGAGAAAC AAAATTACTA TCGTAGTCAG
TACCGGGTCA TCGCTCGACA GGTGCAGCAG GAGTTGGGGT CACTCACGGC CGAACAACTG
GACAGGGAAG TGTACCGCCG GGCGATCACT CGGGGAGATT TGCTGGATGG AGAACGCTTC
CTTCGATTCA GAGAGGATGA ACAGGCAGAA ATTTCGGCAC AACCCGTTCG GCAAAAGCCT
GAAATCGGGG TCAAAACACC GAAGGAATCG ACTCAATTTC ACCAGCATCA AGTTCAGGAG
AATGATTTTG AGCTTTAA
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| Protein sequence | MRSLHTITSG HQEKEDYYTQ DESLCDGQAD YYGQSAQSTT ESSVQSLTQA LWYGKGAARL
GLVGIVQRQD FQSVFYGDQP GGQERIRGER PNPDTKERLA HDLTLSAPKS VSMTLHLGGD
ERLFQAHLEA VQETLDLVES RYAQTRVQID GERRVMRTGH LIAAILPHHT SREGDLQLHC
HCVLMNGTFC PDGNWRSLWH EGMVNAEWLG SYYRLRLAQK VQDLGYAIDE TRLEQGGAFE
IQGYSREAIE AFSKRSRQIV AYLEQHRQCV NSATRDGAVL TTRKAKQMEG TLEDYQARWR
LEANVLGINA VLPQAQPVTL YGYGTAREEL ASAIRHLSER SVSFSREDLY SSVFDRIQAF
DIAQLDAVIA EQKDLIPVQG GRFTTVTALE REITTLRDWM QGQGKTTPLM DETTAQALLE
RSALNSGQAT AIAGIVSAGD QHLILHGLSG VGKTTALREL KRLIQESDSK PDIRGYSPTI
AAAATLAQSL QISTSTVESL VLKPPEPLAD QLWIIDEAGM ISARQMAIIL KKANAVGARL
LLVGDPRQNP AIEAGSPMRS LIQHGATTFS LREIIRQQNA VQRRAVELMA TGHPVHALSL
LTEHGYVQEI SDPQARSQAI AHQWLTLSDS ERQNTLIVTG TNAERRAIHQ QLRRGLRDEE
GLGEDQLFRQ LINRQLTTEQ KLRWENYRVG DYIRLHRNYE STLLGKGRLY QVVGIRDRQL
LVESEGGRLL WFDPARYRDK EVFKTGEIAI APGEQLRWTL TDRKTGQING SQVSVREIND
DHLTVVDDQG QEWRINGRLP LTLDYAHVTT AYSAQGLTAE RVIVSATNNP TSAQEPFYVK
ISRQVRELQI YVEDLEGLRE WVGRSVAQMN PLELIGGHDV KRERQFGATG AHDEPEAGQP
DRPEQNLSGG EHSLKVDAGL EPQYRPPHHA TGTSDVSRPV PRGSGEAEAF GDVRCDSSTG
FGSEGIEGPD RPFSIDRYPD QLVPQPDPSR NQCVNPLLIQ QRFDQIAQQM GAVFPGNPET
SLNATFGQSH YRGLAEFAQE LEYLGEEDLC QTLQDITHAL VEVERCLERS LQQVKLDTIT
DALQSWRSEQ ALSEAIAQIA TVQAQAEEPD SLILGTVLQE VRKLPYRREE VDHLVERVEE
WQAEQDLSAV LEQLGRTINE LKPSFFSPGY QAMAELAEAV GDRPAEAVIR EHLQALQDAT
LQIQQRLLQN PGLEQLAVAV RSLRENPVIA EGAAAEPLQQ VAEHLTAYGL NPTPPPQKLQ
PFWQPQYLEE PPAGFDPVHW QEFQRSAIHP DLIVANAESI DGWRVYERLL SEKLAEMGSG
QYVTAAMARE MRRYEQVAEG GWWGKAGIDP QSLPGLQPGE QPTLSTWGCF KPDHPRMDVS
KSDRTGQPKT IKYEHPVGVQ RGLYLPIVPD SLAKRIYQKY QIQPTSTEQQ SGFWFVVLHY
NLPITITEGV KKTWASLSQG EVTIGVSGVN GLYRTTDVGG HRLPQRQLHP DIAIFVTPGR
EFRFAYDHDT KPATVYNVQR DRVRGIELLE ARGCLCKIVQ WSGDKGLDDL IAHQGANAYT
RAQLQAISAE PEKQNYYRSQ YRVIARQVQQ ELGSLTAEQL DREVYRRAIT RGDLLDGERF
LRFREDEQAE ISAQPVRQKP EIGVKTPKES TQFHQHQVQE NDFEL
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