| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpal_2759 |
|---|
| Symbol | |
|---|
| ID | 7270868 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanosphaerula palustris E1-9c |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_011832 |
|---|
| Strand | - |
|---|
| Start bp | 2887507 |
|---|
| End bp | 2889276 |
|---|
| Gene Length | 1770 bp |
|---|
| Protein Length | 589 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 643571347 |
|---|
| Product | indolepyruvate ferredoxin oxidoreductase alpha subunit |
|---|
| Protein accession | YP_002467741 |
|---|
| Protein GI | 219853309 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG4231] Indolepyruvate ferredoxin oxidoreductase, alpha and beta subunits |
|---|
| TIGRFAM ID | [TIGR03336] indolepyruvate ferredoxin oxidoreductase, alpha subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 10 |
|---|
| Fosmid unclonability p-value | 0.532665 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGAAAAAC GATACGCTCT TGGAAATGAA GGCATTGCCC ATGCATGCCT CGAAGCAGGG
ATGGACTTTG CAAGCGGGTA CCCAGGGACG CCGTCCTCCG AGGTGATCGA CACTCTGCGT
ACAAAAGCGC GGGGGAATGC TTACATCGAA TGGTCGGTGA ATGAGAAAGT CGCGCTTGAG
AATGCACTTG GGGCCGCATG GTGCGGGCTC CGGGCCCTCT GCACGATGAA GCATGTGGGT
CTGAACGTGG CCGCCGACCC TCTGATGACC AGTGCCTACA CCGGAGTCAT CGGCGGGCTG
GTGGTGCTCA GTGCCGACGA CCCGTTTGCC CACAGTTCTC AGAACGAGCA GGATAGCCGG
CGGTACGCTC ACTTCGCCCG GATTCCCTGT CTGGACCCGA CCGGGGTGCA GGACGCTCAT
GACCTCATGA AGGACGCGTT CGTCCTCTCC GAGGAGTTTC ACCTTCCGGT GCTCTTCCGG
CCGACGACGA GGATCTGTCA TTCCAAGGGG GACGTCACCT TCGGTGAGGT CGCGACCGAG
CACCGGACCG GTTCGTTCAC CAGGAATCCA GCCCAGTATG TCGTGATCCC GGCCCATACC
AGGGTGTTAC ATAAGGAACT GAATAAAAAA CAACAGCCCC TCGCTGCAGC TCTGGTGAAG
AAGGGGTACA ACACCGGGAC GATTCGGGGG CGACGTGCAG TGATCACCGG CGGGATCGCG
GCTTCGTACC TGCAGGAGGT GCTCCCTGAG GATGTCTCGC TGATGGTGAT CAGGGCGTAT
CCGATCGACG AGGAGTGGCT TGGCCGTTTC GTCCAGGAGC ATGAGGAGGT GCTGGTTGTC
GAGGAGCTGG CCCCGGTTAT CGAGGAGGTG GTCAGGCAGG TGGCCGGTTG TATCAGGGTT
CATGGGAAGA AGGACGGATG CTCGCCATAT GAAGGGGAGT TCTCGCCTGC ACTGGTCGCT
GATATCCTGG TTCGGGCCGG GTTCCTCGAT CAGACCCCGT TTCCGGCGGT GACCCCGGAA
CAGAACCTGC CACCGCGGCC GGCGATCCTC TGTGCTGGGT GCATGCACCG GGCAACCTTC
TATGCGATGA AGAAAGTCTT TGCCGATGGG ATCTTCCCGA GCGACATCGG GTGTTACACC
CTCGGACTGC AGCTCGGAGC GGTCGACACG ACGATCTGCA TGGGAGCCTC GATCACGGTC
GCGAGCGGGA TCGCCCACTC TGGGGAGACG AGGCCGGTGG TCTGCACCAT CGGAGATTCG
ACGTTCCTTC ACACCGGTGT CCAGGGTTTG ATCAACGCGG TCTACAATGG GGCTGACATG
GTCGTTGTGA TTCTGGATAA CCGGATCACC GCGATGACCG GCCATCAGCC GAACCCGAAC
ACCGGGGTGA CGGCAACTGG CACGCTGGTG CCCCCGCTCT CGCTCGAGGC ACTGGCCAGG
GCTTGTGGAG CACGGTTTGT CGAGACGATC GATCCCTATG ACCTGACCGG GATGCTCCGG
ACCTTTGAAG AGGCGAAGGG GCGGTCTGGG GTGAGAGTGA TCATCGCCAG ACAGGCCTGT
GTGATCACCG AGAAGCGGGC TAAGGTGAAG CGGGGGATCT ACGCGATTCT CACTGACCGA
TGTACCGGCT GTCGGGCCTG TATCAGGTTC GGCTGTCCGG CGATAGAGTT TGAGGACGGG
AAGGCCGTTG TCAACGATCT CTGCAGTGGC TGTGGGGTCT GCACAGCGAT CTGTCCTTTC
GGGGCGATCG CACGCGGAGG GAGACGATGA
|
|---|
| Protein sequence | MEKRYALGNE GIAHACLEAG MDFASGYPGT PSSEVIDTLR TKARGNAYIE WSVNEKVALE
NALGAAWCGL RALCTMKHVG LNVAADPLMT SAYTGVIGGL VVLSADDPFA HSSQNEQDSR
RYAHFARIPC LDPTGVQDAH DLMKDAFVLS EEFHLPVLFR PTTRICHSKG DVTFGEVATE
HRTGSFTRNP AQYVVIPAHT RVLHKELNKK QQPLAAALVK KGYNTGTIRG RRAVITGGIA
ASYLQEVLPE DVSLMVIRAY PIDEEWLGRF VQEHEEVLVV EELAPVIEEV VRQVAGCIRV
HGKKDGCSPY EGEFSPALVA DILVRAGFLD QTPFPAVTPE QNLPPRPAIL CAGCMHRATF
YAMKKVFADG IFPSDIGCYT LGLQLGAVDT TICMGASITV ASGIAHSGET RPVVCTIGDS
TFLHTGVQGL INAVYNGADM VVVILDNRIT AMTGHQPNPN TGVTATGTLV PPLSLEALAR
ACGARFVETI DPYDLTGMLR TFEEAKGRSG VRVIIARQAC VITEKRAKVK RGIYAILTDR
CTGCRACIRF GCPAIEFEDG KAVVNDLCSG CGVCTAICPF GAIARGGRR
|
|---|
| |