| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpal_2665 |
|---|
| Symbol | |
|---|
| ID | 7272487 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanosphaerula palustris E1-9c |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_011832 |
|---|
| Strand | + |
|---|
| Start bp | 2790711 |
|---|
| End bp | 2791274 |
|---|
| Gene Length | 564 bp |
|---|
| Protein Length | 187 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 53% |
|---|
| IMG OID | 643571256 |
|---|
| Product | putative signal transduction protein with CBS domains |
|---|
| Protein accession | YP_002467652 |
|---|
| Protein GI | 219853220 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG2905] Predicted signal-transduction protein containing cAMP-binding and CBS domains |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 2 |
|---|
| Plasmid unclonability p-value | 0.000148572 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 11 |
|---|
| Fosmid unclonability p-value | 0.84733 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAACAAT CTTCTGATTC CATCCACCTG GAGACCCACG TGCAGTTGAA GGAGATGATG
CGTCGTCATC CCGCAACAAT AGACTACAAC GCAACGGTAG CCAGAGCTGC AATGACCATG
TGCAGTGCCG ACGTCGGCAG TTGCATAGTG CTGGAGAATA ACCTCCCGAT AGGGATTGTA
ACCGAGCAGG ACATCAACTG CAAGGTAGTC GCAAAGAATC ATAGGCCAGG GGAGGTCAGA
GTCAGTGAGA TAATGAGCAC CCCCCTGATC ACAATAAATG CAGAGCGGAC CGTCAGTGAG
GCTGCCAGTA TGATGGTGAA GCACCGGGTC AGGCGACTGC CGGTCGTCGA CGAAATGAAC
AGGGTGATCG GGATCGTTAC CGTTCGAGAC CTGCTGTCCG TGACCAGCGA GATCAATGAG
ATCATGAATG ATCTGATCGA GATCAATAGG CCTGACCGAT ATGATGGAGG GATCTGTGAG
CGATGCGGAA TCATGGCCAC AGACCTGCTG CGTGTCGACT CTATGATGCT CTGCGGCAAC
TGCCGTGAGG AGGAACACCT GTGA
|
|---|
| Protein sequence | MKQSSDSIHL ETHVQLKEMM RRHPATIDYN ATVARAAMTM CSADVGSCIV LENNLPIGIV
TEQDINCKVV AKNHRPGEVR VSEIMSTPLI TINAERTVSE AASMMVKHRV RRLPVVDEMN
RVIGIVTVRD LLSVTSEINE IMNDLIEINR PDRYDGGICE RCGIMATDLL RVDSMMLCGN
CREEEHL
|
|---|
| |