Gene Mpal_2649 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMpal_2649 
Symbol 
ID7272471 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanosphaerula palustris E1-9c 
KingdomArchaea 
Replicon accessionNC_011832 
Strand
Start bp2776684 
End bp2777940 
Gene Length1257 bp 
Protein Length418 aa 
Translation table11 
GC content60% 
IMG OID643571240 
Producthypothetical protein 
Protein accessionYP_002467636 
Protein GI219853204 
COG category[S] Function unknown 
COG ID[COG4198] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.804113 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.316005 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTGATCC TCTATCCGTT CCCGGCAATT CGTCCCGACC CAGTACTGGC CCAACAGATC 
GCCTCTGTTC CCTATGATGT GGTGAGTGCA GACGAGGCGC GGGCCTGTAT CCGGAAGAAT
GAACTCAGTT TTCTCCGCGT GATCAGATCC GATGCGGAGC TTCCCGACCT CCCCCCCAAT
AACGACCAGG TCTACCTGGC CGCACAACAG CGATACGACC AGATGTACGC CGCAGGCCAG
ATCAGGGCTG ACGACAAACC CGGTCTGTAC CTGTACCGCG TCGTCCAGGG AGACCAGATC
TTTCTTGGCC TCGTCTGCTG CCTGGACGTC GAGGACTATA TCAACGGGAC GATCCGAAGG
CATGAACTGA CCCGCTATGA CAAGGAGGAG GACCGGACCC GGCACATCGG GGCTGTCAAC
GCCAACACCG GCCTTGTCTT CATCCTCTAT CGCGACCAGG CATCACTCGC CGACCGCCTC
GCCTCGCTCG TCCCTGCACG GGCACCGGAT ACCGAAGTGA CCAACAAGCA GGGCGAACGT
CATCAGATCT ACCAGATCAC TGATGAAGCG ACCATGGCCA CAATCCGGGA CCTCTTTGCA
ACCGTGCCGG CCCTGTATAT CGCTGACGGC CACCACCGGG CCAAGTCAGC TGTGAACGTG
GCGCTGAAAC GACGGCAGGA AAAGACCGCC ACCAAGGAGT CAGAACGGTT CATGGCTGTC
CTCTTCGCCG ACGACCGGGT CAAACTCCAT GGCTACAGCC GGCTGGTCAC CGATCTCGGC
TCATATACCA CCGGTACATT TATCGAAAAA CTGAGGTCCC TCGGCACCGT CACCGAGTAC
GGCCTCGTGG AGACCAGCCG GTTCCACATT CCTCCGGCCG GTGAGACCTG CGGAAGGCAC
CTGCTCCACA TGTACCTGGA CTCGACCTGG TATGAACTCT CATTCCCTGC TGACCCGGCA
GAGGATCAGA TCCAGGCACT GGACGTCCAG TTCTTGCAGA CCCATGTCCT CGAAACGCTG
CTCGACATCA ACGACCCCCG TGGGGATCCC CGTCTCTCGT ACATGGGTGG AGCCAGACCG
CTCTCTCATC TCACCGCAGC GGTCGACTCG GGAAAATATG CGGTCGCCTT CTCTGTCCAG
CCGCTCTCGA CCGGGACGGT GCTGTCGATC GCAGACAACG GCCAGGTGAT GCCGCCCAAG
TCCACCTGGT TCGAGCCGAA ACTGCTCAGC GGCTACGTGA TGCATCAACT CTCCTGA
 
Protein sequence
MVILYPFPAI RPDPVLAQQI ASVPYDVVSA DEARACIRKN ELSFLRVIRS DAELPDLPPN 
NDQVYLAAQQ RYDQMYAAGQ IRADDKPGLY LYRVVQGDQI FLGLVCCLDV EDYINGTIRR
HELTRYDKEE DRTRHIGAVN ANTGLVFILY RDQASLADRL ASLVPARAPD TEVTNKQGER
HQIYQITDEA TMATIRDLFA TVPALYIADG HHRAKSAVNV ALKRRQEKTA TKESERFMAV
LFADDRVKLH GYSRLVTDLG SYTTGTFIEK LRSLGTVTEY GLVETSRFHI PPAGETCGRH
LLHMYLDSTW YELSFPADPA EDQIQALDVQ FLQTHVLETL LDINDPRGDP RLSYMGGARP
LSHLTAAVDS GKYAVAFSVQ PLSTGTVLSI ADNGQVMPPK STWFEPKLLS GYVMHQLS