Gene Mpal_2615 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMpal_2615 
Symbol 
ID7271884 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanosphaerula palustris E1-9c 
KingdomArchaea 
Replicon accessionNC_011832 
Strand
Start bp2738052 
End bp2739296 
Gene Length1245 bp 
Protein Length414 aa 
Translation table11 
GC content49% 
IMG OID643571211 
Productmajor facilitator superfamily MFS_1 
Protein accessionYP_002467607 
Protein GI219853175 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2814] Arabinose efflux permease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.543529 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTTATCA CACCCTTTAA ACCCACGAAA TTTCAACCAA CGAGATGGAC ATTACTTTTT 
CTCCTGCTCT CGGCCATGAT GATCCTCATG GGAGGAGCAG CTATCGCGCC GGCTCTGCCA
TTGATCAGCG CAGCATTTCC CGATACACCA GACTCCCTCA TCTCCTTAAT TGTTACACTC
CCTTCGCTCG CAATTGCCAT CTCCGGCATC TTCATCGGTG CTCTTTCGGA TAAGATCGGC
AAAATGAAGA TCCTTGTTGC CTCTGTTGCT ATCTTCACCA TCGCAGGATG TTCCGGATAT
TTTCTCACCT CGATACATGC ACTATTACTC AGTAGAATCA TCCTTGGAAT CGGGATTGCC
GGTATCACCT GCACGACATC CTCTCTGATC CCCTGTTATT ACGAGGGACC TACCCGTGCC
AAAGTTCTCG GTTATCAGGC GGCTGCTATG GGGTTCGGGG TATTAATTCT TGAAATGAGT
GGGGGACTTC TCGCCGGGAT CTCCTGGCAT GCAGCGTTCC TGATCTACCT GATCGGTGTT
GTCATTCTCG CAGGTGTACT TCTCTCGATG AAAGAGCCCG TTCTTCCGAA GATTGAAAAG
AATACGGTAG AAGCCAATGA GGAGTTCCCT CTCTCCCTCC TCCTCTTAAC CTACATAACC
CTGTTTATGG GAAGCATGCT CTTCTACCTC ATGCCTACGA AGTTCCCCTA CTTTATTGCA
AATCTTGATG CAGCACGGAT CTTGGGCGAA AACACCGCAC TTATCAGCGG TCTATTCCTT
GGTATCATGG GTTGTGCCGC ATCAATCATA GGTATCTTTT ACGGGAGACT TGTCTGGAGA
TTCAACCAAT ACACGATCCT CGCCATCATA TTCATCTGCT TTGGTATCGG GTACTGCAGT
CTCGGGTTAG CCACGTCGCT TCCCGTTGTT GCTTTTTCAG TGATCTGTAT CGGTCTGGGT
AACGGTATTC TGATGCCGAC GATCTTAACT TGGATCGCTA CGATCACGCC AAAACAGTTC
CTCGGCAGGG CAAGTGGCGG ATTTTCGGTG GCCCTGAACA TCGGCCAGTT CGCTTCCAGT
CTTGTTGTCG TGCCGGTCAT TGCCATTGCT GCGACAACCA GTACGATGTT CCTTGCATTC
GGATCTCTGG CGTTTGTGAT CGCCCTGCCA TATCTTCTCG CGATGATGAA AGAACGGCAT
ACCCTACCAC AGGGAGTAGT CCGAAAAATG GAATCTGATC TATAA
 
Protein sequence
MVITPFKPTK FQPTRWTLLF LLLSAMMILM GGAAIAPALP LISAAFPDTP DSLISLIVTL 
PSLAIAISGI FIGALSDKIG KMKILVASVA IFTIAGCSGY FLTSIHALLL SRIILGIGIA
GITCTTSSLI PCYYEGPTRA KVLGYQAAAM GFGVLILEMS GGLLAGISWH AAFLIYLIGV
VILAGVLLSM KEPVLPKIEK NTVEANEEFP LSLLLLTYIT LFMGSMLFYL MPTKFPYFIA
NLDAARILGE NTALISGLFL GIMGCAASII GIFYGRLVWR FNQYTILAII FICFGIGYCS
LGLATSLPVV AFSVICIGLG NGILMPTILT WIATITPKQF LGRASGGFSV ALNIGQFASS
LVVVPVIAIA ATTSTMFLAF GSLAFVIALP YLLAMMKERH TLPQGVVRKM ESDL