Gene Mpal_2542 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMpal_2542 
Symbol 
ID7270667 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanosphaerula palustris E1-9c 
KingdomArchaea 
Replicon accessionNC_011832 
Strand
Start bp2670667 
End bp2671365 
Gene Length699 bp 
Protein Length232 aa 
Translation table11 
GC content60% 
IMG OID643571137 
Productprotein of unknown function DUF116 
Protein accessionYP_002467538 
Protein GI219853106 
COG category[S] Function unknown 
COG ID[COG1852] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTCGAGC TCACCCTCCT CGATCACTTT CTCTTCATCA TCGGCGAGGT GACACTGCTG 
CTGCTGATCG CACTCGGTCT GCTGATCCTG GTGCTGCTGA TCCTCACGCT GGCCTCGTTC
CACAGCGGCA GGCTCTACTT TCCAAGGATC TTAAAGCCCG GCTTCACGGC GCTCGAAGGG
GTGATGCGGG CGATCTTCAA GTTCATCGGT CTCGACGATC AGGAGATGCT GGCCTTCTCG
GTCCGTCTCC TCAATACAAT GAACCTGAAG GCCTTCGCCG CGATCCCGGT CAATGAACGG
GCGATCTTCC TTCCGCAATG CCTCCGTGCA GCCCGGTGCC CCGCCCACCT GACCCCGGAA
GGGCTCAAAT GCGTTTCGTG CGGGCAGTGT GGTATCGGGG AGATTCGACC GGCGCTCGAG
CACCTCGGTT ACCGGGTCTT TCTGGTGCCA GGCTCCTCGT TCATCAAGCG GATGGTAAAA
CAGTACCACC CTCGTGCCCT GGTAGGGGTC GGGTGTCTGC TGGAGGTGAA GGAGGGGCTT
GAGATGGCCG ACAAGATGCA CCTGATCGGG CTCGGTGTGG TGACGCTAAA AGATGGGTGC
GTGGAGACTC TGGTAGATTG GAATGCCCTC TTCGAGGTCG CGACCCTCGG GCTCGATCCA
TCAACTATTC CCGTAGACCT TCACGTGCCG GCCGCTTAA
 
Protein sequence
MVELTLLDHF LFIIGEVTLL LLIALGLLIL VLLILTLASF HSGRLYFPRI LKPGFTALEG 
VMRAIFKFIG LDDQEMLAFS VRLLNTMNLK AFAAIPVNER AIFLPQCLRA ARCPAHLTPE
GLKCVSCGQC GIGEIRPALE HLGYRVFLVP GSSFIKRMVK QYHPRALVGV GCLLEVKEGL
EMADKMHLIG LGVVTLKDGC VETLVDWNAL FEVATLGLDP STIPVDLHVP AA