| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpal_2505 |
|---|
| Symbol | |
|---|
| ID | 7271674 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanosphaerula palustris E1-9c |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_011832 |
|---|
| Strand | - |
|---|
| Start bp | 2641493 |
|---|
| End bp | 2642296 |
|---|
| Gene Length | 804 bp |
|---|
| Protein Length | 267 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 46% |
|---|
| IMG OID | 643571100 |
|---|
| Product | Methyltransferase type 11 |
|---|
| Protein accession | YP_002467501 |
|---|
| Protein GI | 219853069 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG2227] 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-benzoquinol methylase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.618552 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 9 |
|---|
| Fosmid unclonability p-value | 0.420988 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGATGAAT CCGACTCGAT CACAGATGAA CTGCAGGCAG TCCGGTGGAA CAAACGGGCG
GGACAGTTTG GAAATGATGG AGATGAGGAG AGTAAACGGA AGAAGAACGC TGAATTTTTT
AGACATCTGG ATGAAGCTGG TTTCCAACCA TCAGGGGCAA CGGTTCTGGA TCTCGGTTGT
GGTTACGGAT CCCTGTCTAT TCCCCTTGCC CGTGCAGGTG CAGAGGTGAC GTCACTTGAT
ATTTCATCCG GAATGCTCGA CCGCCTCAAG GAGACGGCAG AGCGTGAAGG ACTGCATATC
AACCCGGTCG AATGCTCGTG GTGGTCAGCA GATATCGATG AACTGGGGTT TCGAAATAAG
TTTGATCTTG TCATAGCATC GATGACACCC GCTATCAAAG ACGTGGATAC TTTTGATCGG
ATGACGGCTT GTTCAAAGAA GTACTGTTAT TATAGTAATT TTATCAGGAA CAATCTGGAT
AAAATTCCCC GTGATATCTA TGTCAGGATT CTGGGAGTTG CACCCGAGCA GAATCTCTTA
ACGACGGGGT TGTTATATCC ATTCATGTAC CTTTATACCC TGGGTTATCA TCCGATCATC
AAGTTCGACT GTAGATCGGA CCATCGGGAA CAGGATTGGT CTGAAGCGGC TGAAAAGGCA
ATGGATTATT TGCAGATCAA TCTGGATCTC TCCGATGAGA TAAGAGAAAA AATCAGGGAC
TTCTATAAAT CTGCCTCCAT TCGTGGCAGG TTCATTTCTG ACTCTGTAAA ATACATCGGG
ATGATGGTAT GGTCGGTGAC ATGA
|
|---|
| Protein sequence | MDESDSITDE LQAVRWNKRA GQFGNDGDEE SKRKKNAEFF RHLDEAGFQP SGATVLDLGC
GYGSLSIPLA RAGAEVTSLD ISSGMLDRLK ETAEREGLHI NPVECSWWSA DIDELGFRNK
FDLVIASMTP AIKDVDTFDR MTACSKKYCY YSNFIRNNLD KIPRDIYVRI LGVAPEQNLL
TTGLLYPFMY LYTLGYHPII KFDCRSDHRE QDWSEAAEKA MDYLQINLDL SDEIREKIRD
FYKSASIRGR FISDSVKYIG MMVWSVT
|
|---|
| |