Gene Mpal_2360 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMpal_2360 
Symbol 
ID7272081 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanosphaerula palustris E1-9c 
KingdomArchaea 
Replicon accessionNC_011832 
Strand
Start bp2503988 
End bp2504506 
Gene Length519 bp 
Protein Length172 aa 
Translation table11 
GC content59% 
IMG OID643570962 
Productorotate phosphoribosyltransferase 
Protein accessionYP_002467365 
Protein GI219852933 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0461] Orotate phosphoribosyltransferase 
TIGRFAM ID[TIGR00336] orotate phosphoribosyltransferase 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.166662 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTGAATG AAAAGACAAT CACAGAACTG CTGATCGATT ACAAGGCCAT TGAGTTTGGA 
GATTTCATCC TCGCGTCCGG TGCCATCAGC AGATATTACA TCGATATCAA AACGGCAATG
ACACATCCTG CACTGCTGAA CCGCGTTGGA ACAGAGTTCT CAGAGCGGGG ATCCTTTGAT
GTCGTCGCCG GGGTCGCCGT CGGCGGGGTT CCACTGGCCG TAGCCACCGG GTTGGCTGCC
GGCAAGGAGT ATGCGATCGT TCGATCGGCC GCCCGGGATC ATGGTAAGGC GGGGGTGGTC
ATCGGGGATG TCAAGGGTAG AAAGGTGCTG CTGGTCGAGG ATGTGACCAC CTCCGGAGGA
TCGGCCCTGT ACGGTGTCGA GCAGCTCCGG GCAGCTGGTG CCACTGTGAC GACGGTGATG
ACTGTGGTGG ATCGTGAGCA GGGGGCAGTC GAAGCCCTGG CTGCTGTTGG GGTACGGCTG
GTTCCGCTGG TTAGAGTCAG CGAGCTCCTC CACCTGTAA
 
Protein sequence
MVNEKTITEL LIDYKAIEFG DFILASGAIS RYYIDIKTAM THPALLNRVG TEFSERGSFD 
VVAGVAVGGV PLAVATGLAA GKEYAIVRSA ARDHGKAGVV IGDVKGRKVL LVEDVTTSGG
SALYGVEQLR AAGATVTTVM TVVDREQGAV EALAAVGVRL VPLVRVSELL HL