| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpal_2333 |
|---|
| Symbol | |
|---|
| ID | 7272054 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanosphaerula palustris E1-9c |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_011832 |
|---|
| Strand | - |
|---|
| Start bp | 2480563 |
|---|
| End bp | 2481270 |
|---|
| Gene Length | 708 bp |
|---|
| Protein Length | 235 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 56% |
|---|
| IMG OID | 643570938 |
|---|
| Product | cobalt transport protein CbiM |
|---|
| Protein accession | YP_002467341 |
|---|
| Protein GI | 219852909 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG0310] ABC-type Co2+ transport system, permease component |
|---|
| TIGRFAM ID | [TIGR00123] cobalamin biosynthesis protein CbiM |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 12 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCATATTA TGGAAGGATT TCTACCGGCC GGCTGGTGTC TCGTATGGTG GCTCATCGCC
CTGCCGTTCC TTGTCATGGG AATTATTCAA CTGCGTCGAA TGATGAAAGA AGACCGGGAG
TACCTGCCTT TGCTCGGGGT CTGCGGAGCG TTCATCTTCA TCCTCTCGGC CCTGAAGCTC
CCTTCGGTCA CTGGGAGTTG TTCCCATCCG ACTGGGACTG GTTTGTCGAC CATCTGTTTC
GGGTACTGTG TCACTGCAGT CGTCGGTGCG ATCGTGCTTC TCTTTCAGGC CCTCCTGCTT
GCTCATGGCG GCCTCTCCAC GATGGGCGCC AACATGGTCT CCATGGCCAT CGGCGGTCCG
ATAGCCGGGT ACGCCGTGTA CAAACTCATG AAGGACACGT CGATCAACAT CTATGTGACC
GTCTTTCTGG CATCTGCCGT TGCTGATATT GTCACGTATA TCATCACCTC TTTCGAGCTG
GCCCTGGCCT ACCCGGCCCA GGTCGGCGGG TTCCTGGCAT CATTCTCAGC GTTCTTCTCG
ATCTTTGCGA TCACTCAGAT TCCGCTCTCG ATCATGGAGG GTGTCGTGCT CGCCCTGGTC
TTCAAGTACA TCATCCAGCT CAAGCCTGAG ATCATCCTGA AACTTCATGT CTTCTCAGAG
GAACAGATCG CGAAAGCGCG GCTGGCCGGC GATGCAGAGG TGGCCTGA
|
|---|
| Protein sequence | MHIMEGFLPA GWCLVWWLIA LPFLVMGIIQ LRRMMKEDRE YLPLLGVCGA FIFILSALKL
PSVTGSCSHP TGTGLSTICF GYCVTAVVGA IVLLFQALLL AHGGLSTMGA NMVSMAIGGP
IAGYAVYKLM KDTSINIYVT VFLASAVADI VTYIITSFEL ALAYPAQVGG FLASFSAFFS
IFAITQIPLS IMEGVVLALV FKYIIQLKPE IILKLHVFSE EQIAKARLAG DAEVA
|
|---|
| |