| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpal_2312 |
|---|
| Symbol | |
|---|
| ID | 7270573 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanosphaerula palustris E1-9c |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_011832 |
|---|
| Strand | + |
|---|
| Start bp | 2460401 |
|---|
| End bp | 2461252 |
|---|
| Gene Length | 852 bp |
|---|
| Protein Length | 283 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 54% |
|---|
| IMG OID | 643570917 |
|---|
| Product | tetrahydromethanopterin S-methyltransferase subunit C |
|---|
| Protein accession | YP_002467320 |
|---|
| Protein GI | 219852888 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG4061] Tetrahydromethanopterin S-methyltransferase, subunit C |
|---|
| TIGRFAM ID | [TIGR01148] N5-methyltetrahydromethanopterin:coenzyme M methyltransferase subunit C |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 10 |
|---|
| Fosmid unclonability p-value | 0.497237 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACAGCAC AAATTACAGT AACTGAGGGA GGAATTCCTC ACAACAAGGT CATGATCATG
GGGCTTGTCG GCTCGCTGAT TGCGATCTAC CTCACCTATC TGAACACCCT GATGGGTACG
CAGGCTTTCT CCTTCTTTGG AGGATTCGGT GCCATCGCCG CCCTGATCTG GGGAAGCAGC
ACCATCAAGC GACTCTGCAG TTATGGTATC GGGACTGGTG TCCCATCCGC AGGGATGCTC
GCGTTTGGTT CAGGTGTGAT CGGTATGCTG ATGGCAACCA AGTTCGGTAT GCTGACTCCA
GTCCTCGCAC TGATCATCGC CGCAATCGTC GGCGCCATCC TTGGATTCAT CTCAAACAAC
ATCTTAAACA TGCGCATCCC TGTGATGATT CAGTCCCTCA CTGAACTCGC AGCCGTCGGT
GCACTGGTCC TGCTCGGATT CAGCGCTATG GCAACTGGTG GATTCTCGAT GGCTACCCTG
ACCACCGCCA CAACGACGGT GCTCGGCACA CAGGTTGCAT CATACACTGC ATCACTGATC
GGGGGAAGCA TCCTCGCAGT ACTCTTCATG CTCGGTGCAA TCGCACTCCA GCACGGATTC
AATGCTTGCC TAGGGCCAAA CGAGAAGCAG GATCGGACCC TGATGCTGAC CGCAGAGTGC
GGGTTCCTCA GCATGATCAT GGTCGCCGTC ATCTCATTCG CCTTTATCGG CATCGGCGCT
GCAGTTCTCT CTTTACTGAT CTCGCTGGTT GGCTGGTATT ACACCTACAC GCAGTTCTTC
GCACTTTCAA AGCGCGATGC AGCATCATGG CTCGATGCAA AGCCGATCCT CGAAGTGGAG
AGTGAGGCAT AA
|
|---|
| Protein sequence | MTAQITVTEG GIPHNKVMIM GLVGSLIAIY LTYLNTLMGT QAFSFFGGFG AIAALIWGSS
TIKRLCSYGI GTGVPSAGML AFGSGVIGML MATKFGMLTP VLALIIAAIV GAILGFISNN
ILNMRIPVMI QSLTELAAVG ALVLLGFSAM ATGGFSMATL TTATTTVLGT QVASYTASLI
GGSILAVLFM LGAIALQHGF NACLGPNEKQ DRTLMLTAEC GFLSMIMVAV ISFAFIGIGA
AVLSLLISLV GWYYTYTQFF ALSKRDAASW LDAKPILEVE SEA
|
|---|
| |