Gene Mpal_2307 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMpal_2307 
Symbol 
ID7270568 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanosphaerula palustris E1-9c 
KingdomArchaea 
Replicon accessionNC_011832 
Strand
Start bp2455335 
End bp2455970 
Gene Length636 bp 
Protein Length211 aa 
Translation table11 
GC content55% 
IMG OID643570912 
Productmethyl-coenzyme M reductase I operon protein C 
Protein accessionYP_002467315 
Protein GI219852883 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG4056] Methyl coenzyme M reductase, subunit C 
TIGRFAM ID[TIGR03264] methyl-coenzyme M reductase I operon protein C 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.484481 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCGATGG GACGTGTGAC CCAGGTCGTG GACTGCCGTG AGGCGATGGG GATGGGAAAA 
GGTGGAGGAA TGGCCCAGCG TGGGACCATC TCCGAGTGCC GGTTCCCAGA CGTCATCGTC
GTCGGCATGT CCCCTGGACG AAGACATGTC ACCAAACCAG TCTGTGATAT CACCTCTGCG
CTTCGGCAGC AGGGTGTCGA GTACAGCATC AGCACTTTGA TCTTAAATGC AGGCAGTGGA
GTACCGCCAG ATGCACCGAG CATCGCAGGC GGGGTGCTCG GTGCCTACTT CGGCCTGACT
GAGAAAGAGA TCAGGCAGAT AGAACGACAC AAGGTCGCAA TTCTGCATCA CGGGAACGTA
CGGTCCCATG TGGTGCAGAA GGTCAGATAT ATTCTGCAGT ACTGCAACAT CCCTGCAGTG
GTGGTCTCAC AGGCTCCCAT CGACTTTGAA GATCTGGCTA AAGAAGGCGT GAAGACCGCA
CTGGTGATGC CCCCTCCTGA CAAGATCAGG ACGCAGGGAA CAGTCATGGC GATCGTATCA
GGCGTCACCA GAGGACAGAC ACCTACACGT GAGAAGATGG CAGACGTCGT CAGAGAAGTA
ATGAGATTGA TGAAAAACCC AAACAAATCG GAGTAA
 
Protein sequence
MPMGRVTQVV DCREAMGMGK GGGMAQRGTI SECRFPDVIV VGMSPGRRHV TKPVCDITSA 
LRQQGVEYSI STLILNAGSG VPPDAPSIAG GVLGAYFGLT EKEIRQIERH KVAILHHGNV
RSHVVQKVRY ILQYCNIPAV VVSQAPIDFE DLAKEGVKTA LVMPPPDKIR TQGTVMAIVS
GVTRGQTPTR EKMADVVREV MRLMKNPNKS E