| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpal_2253 |
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| Symbol | |
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| ID | 7272550 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanosphaerula palustris E1-9c |
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| Kingdom | Archaea |
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| Replicon accession | NC_011832 |
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| Strand | + |
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| Start bp | 2401083 |
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| End bp | 2403344 |
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| Gene Length | 2262 bp |
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| Protein Length | 753 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 643570865 |
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| Product | DEAD/DEAH box helicase domain protein |
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| Protein accession | YP_002467269 |
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| Protein GI | 219852837 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1205] Distinct helicase family with a unique C-terminal domain including a metal-binding cysteine cluster |
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| TIGRFAM ID | [TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.295208 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCGCTG AAGCCCTGCT GGCAGCCCTG AAGGGTTCGG AACGCCACAG CAGGCGAATT
GCTGCAGTTA GGTCTATCGA GGGGCGGGAG GCTGCGTATG GCTCCCTGGA ACGTCCGCTC
TCCTTGCGCC TCGAAAGGAT GCTCGACGAG CGGGATATCC GCCTGTACAC CCACCAGTGC
GCGGCTATCG AGGAATGCAG ACTGGGGGGA AGTCTGATCC TCACCACCCC TACGGCCAGC
GGCAAGACCC TTGGGTTTTC GCTGCCGGTG CTTGAGCGAC TCGAAACAGA GCCGGCTGCC
ACCGCTCTCT TCCTCTACCC GACCAAGGCG TTGGCCAGGG ACCAGATGCG AGTGCTCCTC
GATCTGGAGG CTGCCAGTGG TATCCGGATA GGACCGGCGG TCTACGACGG GGACACGCCC
CAGGGAATGC GGCCGCAGAT CCGCAACCAG TCCAGGATTG TAATCATGAA TCCGTATGAA
CTGCACCAGG TCCTTCCCTG GCATTATAAG TGGTCCCGGT TCCTGGCAGG ACTGCAGTTC
ATCGTTATCG ATGAGGCGCA CCGGTATCGA GGGGTCTTCG GCTCCTCGAT CGCCCTGCTG
CTTCGGCGGC TGGAACGGAT CTGCCGGGGG TACCGGCGGA CCCCGCAGTA CCTGCTCTCG
ACCGCAACAT TGGCGAACCC GGAGGAGTTC GGGAAGATGC TGACCGGCCA TCCCTGTCGA
TTGATCGAGA GGAACGGCGC GCCGCAACAG AAACGGCACG TAATCCTGTA CAACCCATAT
ATACCCGGGG AGACAGGGTC GACGATCACG GCCGCCGCCG AGGTGATGCT CACCTCGGTC
AGACATGACC TGCAGACCCT CTGCTTTGCC CAGTCCAGGA AGACCGCAGA GGTGATCACC
ACAGTAGCGA AGGAGTACCT GCAGCAGGCC GGGGAGGTGG ACCGATACGA ACTGGCGGCC
TACCGGGCCG GGTACCTGCC GTCCGAGCGG CGGGACCTCG AGAACCGGCT CCAGCAAGGT
CAACTCCATG GGCTGACCAC CACCTCCGCC CTAGAGGTCG GGATCGATAT CGGCTCGCTC
GATGCGGTGG TGCTCTGCGG GTATCCCGGC ACGATGATCG CGACCTGGCA GCAGATTGGC
AGGGCCGGCC GACGGGAGGT GCCGTCGGTC GCAACCGTCA TCGCCCAGCA GGGACCGCTG
GATCAGTATT ACATGCATCA CCCCGAGGCG TTCTTCGCCG CCCCGCACGA GCAGGCTATC
ATAGACCTGG GAAACCCGGC GATCGTCTCA GGACAGCTCC TCTGCGCTGC TGCAGAACTG
CCGCTGACTG ACGGCGACCA GGATCTCTTC GGTCCGCTCT TCTCGCCGCT GACGACTGCA
CTCGTCAGAG AACGGCTGCT GGCAGAGACC GAGTCTGGCC TTGTCTATGC CGGAAGACAG
CGGGCTACCG AGGCCGTCAA ACTCGACGGG TTGAGCGGTG ACATCTTCCG GGTGGTCGCT
GGCGGCAGGG TGCTGGAGAC CCTTGACCGA CACCAGGCCT ACCGGGAGGC CTTCGCCGGA
GCCATCCTCC TCCACCAGGG GGAGACTTTC GCAGTGACGG CGATGGAACC GGAGAACCTG
GATATTACCG CCGAACCGGT CGACGTCGAA TACACCACAA AGCCGCTCCA TGCCACCGAG
ATCACCGCCG GCACCGTCGC AACCACCACT GTCCGCCCAG GACTTACCAT CGAGACCGGG
GAGGTGACCG TGCAGGAGAC CTTCACCGGT TACCAGATCA GACAGTACGG CGAGGTGCTC
GCGACCCATC ACCTCGGCCT GCCACCCCTT ACCTTTCAGA CCCGAGGGGT CTCGCTGAAG
TTCTCTGCGA CGCTGCTCCA AGACCTGACT GTAGCCGGCC TCGACCCGGC CGGTGCGCTT
CATGGGGCAG AACACGCCCT GATCGCAGTG ATGCCGGTCC ACCTGCTCTG CGATCGGCAG
GACATCGGCG GAGTCTCGAT GGTGATGGCA CCGGAGACCG GCGGGCCGCT GATCTGTATC
TATGACGGCT GCCCGGGCGG GGCAGGATTG ACAGCGAGGG TGCCGTCCCT GCTCGGGAAG
TTGGCGGCAA TGGCCGGGGA CCTGGTCACC TCCTGCCCCT GTACCGACGG CTGCCCGGCC
TGCATCCACT CCCCTAAATG CGGAAACGAC AACTGTCCGC TCGACAAGCA GGGGACGATC
ATGGTCCTTG CGAAGATCCA GGCGGCACTC TCAACACCCT GA
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| Protein sequence | MTAEALLAAL KGSERHSRRI AAVRSIEGRE AAYGSLERPL SLRLERMLDE RDIRLYTHQC
AAIEECRLGG SLILTTPTAS GKTLGFSLPV LERLETEPAA TALFLYPTKA LARDQMRVLL
DLEAASGIRI GPAVYDGDTP QGMRPQIRNQ SRIVIMNPYE LHQVLPWHYK WSRFLAGLQF
IVIDEAHRYR GVFGSSIALL LRRLERICRG YRRTPQYLLS TATLANPEEF GKMLTGHPCR
LIERNGAPQQ KRHVILYNPY IPGETGSTIT AAAEVMLTSV RHDLQTLCFA QSRKTAEVIT
TVAKEYLQQA GEVDRYELAA YRAGYLPSER RDLENRLQQG QLHGLTTTSA LEVGIDIGSL
DAVVLCGYPG TMIATWQQIG RAGRREVPSV ATVIAQQGPL DQYYMHHPEA FFAAPHEQAI
IDLGNPAIVS GQLLCAAAEL PLTDGDQDLF GPLFSPLTTA LVRERLLAET ESGLVYAGRQ
RATEAVKLDG LSGDIFRVVA GGRVLETLDR HQAYREAFAG AILLHQGETF AVTAMEPENL
DITAEPVDVE YTTKPLHATE ITAGTVATTT VRPGLTIETG EVTVQETFTG YQIRQYGEVL
ATHHLGLPPL TFQTRGVSLK FSATLLQDLT VAGLDPAGAL HGAEHALIAV MPVHLLCDRQ
DIGGVSMVMA PETGGPLICI YDGCPGGAGL TARVPSLLGK LAAMAGDLVT SCPCTDGCPA
CIHSPKCGND NCPLDKQGTI MVLAKIQAAL STP
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