Gene Mpal_2187 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMpal_2187 
Symbol 
ID7270272 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanosphaerula palustris E1-9c 
KingdomArchaea 
Replicon accessionNC_011832 
Strand
Start bp2325649 
End bp2326680 
Gene Length1032 bp 
Protein Length343 aa 
Translation table11 
GC content44% 
IMG OID643570801 
Productglycosyl transferase family 2 
Protein accessionYP_002467206 
Protein GI219852774 
COG category[R] General function prediction only 
COG ID[COG1216] Predicted glycosyltransferases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.804947 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCGACAA CCAACCTCCC AGGTGATATA TTGAATACAA TGCGCTACCC GACGATCGAT 
CCACTCCCCG ATACTGTACG TAGGCCTTTC TGGAGTGTAA TGATTCCAAC ACATAATCGC
GTCAATTATC TGGAGAAAAC GATTAAAAGT GTTCTTGACC AGGATCCCGG TCAAGACTGC
ATGCAGATAG AGGTGATCGA TAATTTTTCT TCACCTGAGT TGAATGTTGC TGAACTCGTC
CGAGAAATTG GGGATTCTCG GGTTTTATAC TATAGACAAC CCCATCTGGT CGACTTTCAG
GAGAACTGGT CGACATGTAT CAGGAGATCA GTCGGAAGAT ACGTGCATAT TCTTCATGAC
GATGACAGGG TTTTGCCGGG GTTTTATAAA GTGTACCAGC AATTTATCGA CCAGCATCCA
GAGGTAAAAT TGGTCTTTTC CCAGGCAATA CATATTGATG ATCGGGATCA GCAGACCTCT
CTCTATAAGC CTGCGATCCC TGACTTCCCG AACGGTGTGA TCGATATGGC GCTCCCTTTG
TTAGTGCAGG AGAATTTTAT CTATTCGACA TCGGTCGTCG TGCCAAGAGA GATATATGAA
AAAATTGGTG GCTTTCATCC CTCTGTCATG CACACCGTCG ACTGGGATAT GTGGCTTCGC
ATATCCCTGG AGGGTCCGAT CGGATATGTT CAACAACCTC TGCTGGCATA TCGCATCCAT
TCTAAATCAG GATCCTACAG TCAGAATAAC ACGGTTGAGT TGATCGATAA AAAATACGAA
GATATCTGTT ATATTATCAA TACCTATCAG GACTATCTGC CCCCCCCTCT CAGGAGAGCC
ACTGCTAAAC ATTTTATGAG ATCATTTGCC ATTAGTGCAA ATACTCAGAT GAAATACTTA
CTCAAACACA GAAAATATCT TCTCGCATCT CATCATGCAC AATGGTCGAA AAAGATGTAT
CCCTCATCAA TCAACCGGAG CAGATTGTGG TGGTATAATC TCTGCTATTT TCGCGAAGAT
ACCTTAACAT GA
 
Protein sequence
MSTTNLPGDI LNTMRYPTID PLPDTVRRPF WSVMIPTHNR VNYLEKTIKS VLDQDPGQDC 
MQIEVIDNFS SPELNVAELV REIGDSRVLY YRQPHLVDFQ ENWSTCIRRS VGRYVHILHD
DDRVLPGFYK VYQQFIDQHP EVKLVFSQAI HIDDRDQQTS LYKPAIPDFP NGVIDMALPL
LVQENFIYST SVVVPREIYE KIGGFHPSVM HTVDWDMWLR ISLEGPIGYV QQPLLAYRIH
SKSGSYSQNN TVELIDKKYE DICYIINTYQ DYLPPPLRRA TAKHFMRSFA ISANTQMKYL
LKHRKYLLAS HHAQWSKKMY PSSINRSRLW WYNLCYFRED TLT