Gene Mpal_2171 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMpal_2171 
Symbol 
ID7270256 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanosphaerula palustris E1-9c 
KingdomArchaea 
Replicon accessionNC_011832 
Strand
Start bp2307448 
End bp2308293 
Gene Length846 bp 
Protein Length281 aa 
Translation table11 
GC content53% 
IMG OID643570787 
Productalpha/beta hydrolase fold protein 
Protein accessionYP_002467192 
Protein GI219852760 
COG category[R] General function prediction only 
COG ID[COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily)  
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.595309 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCTTATA TTACTGTAGG TAAGGAAAAC TCAGGAGATA TTGATCTCTA CTATGAGGAC 
CATGGAACAG GGGATCCGAT TGTACTGATT CATGGATGGC CTCTGTCAGG TGCCTCATGG
GAGAAACAGA TACAGATTCT GATCGATGCG GGGTACCGAG TGATAACGTA CGACCGCAGG
GGATTTGGAA ACTCTGACAA GCCGCTATTT GGCTATGATT ACACTACCTT CGTTGAGGAT
CTGCACTCTC TCGTGAATAG ACTTGGTCTT CAGGATATGG TTCTGGTTGG TTTCTCCATG
GGTGGCGGCG AGGTGGCCCG ATATATCGGT ATGTATGGAT CCGAGCGTGT CAAAAAGGCG
GTCTTTATCT CTGCAATCCC GCCATTCCTG TTAAAGACTG CGGACAATCC TGATGGGGTG
GACAGCAGTG TCTTCGAAGG GCTGAGGCAG GGGGTAATCG CTGACCGGCC GGCATTCCTC
TCCCAGTTCC TCTCGAATTT CTATAATGTT GACGTCCTTG GTGGAAAGTT GATCAGCGAC
CAGGCCATTC AACTCAGTTG GGATGTTGCG TCTCTTGCCT CTCCCAAGGG CACGCTGGAC
TGTATCTCGG CTTGGCTGAC TGATTTCCGA AAAGATCTCG CCCACATCGA TGTGCCTACC
TTGATCGTTC ACGGCGACAG CGACCGGATC TGCCCGCTTC CCGTCACAGG AGAACGCACC
CATGAGGCGG TAAAGGAGAG TAAACTTGTG GTCGTCGAGG ACGGGCCGCA TGGGTTGAAC
TGGACTCACG CCGAACAGTT GAACCGTGCT CTGCTGGACT TCCTTGGTCC CTCGACCGGG
ACCTGA
 
Protein sequence
MPYITVGKEN SGDIDLYYED HGTGDPIVLI HGWPLSGASW EKQIQILIDA GYRVITYDRR 
GFGNSDKPLF GYDYTTFVED LHSLVNRLGL QDMVLVGFSM GGGEVARYIG MYGSERVKKA
VFISAIPPFL LKTADNPDGV DSSVFEGLRQ GVIADRPAFL SQFLSNFYNV DVLGGKLISD
QAIQLSWDVA SLASPKGTLD CISAWLTDFR KDLAHIDVPT LIVHGDSDRI CPLPVTGERT
HEAVKESKLV VVEDGPHGLN WTHAEQLNRA LLDFLGPSTG T