| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpal_2149 |
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| Symbol | |
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| ID | 7270232 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanosphaerula palustris E1-9c |
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| Kingdom | Archaea |
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| Replicon accession | NC_011832 |
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| Strand | - |
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| Start bp | 2283007 |
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| End bp | 2284329 |
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| Gene Length | 1323 bp |
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| Protein Length | 440 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 643570763 |
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| Product | LOR/SDH bifunctional protein conserved domain protein |
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| Protein accession | YP_002467170 |
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| Protein GI | 219852738 |
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| COG category | [S] Function unknown |
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| COG ID | [COG1915] Uncharacterized conserved protein |
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| TIGRFAM ID | [TIGR00300] conserved hypothetical protein TIGR00300 |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.951911 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGACGGCTG GAGAACCAAT ATTAAGCAGC GTCGCCGACA TTGTCTCCAT GCAGGCATCG
CGGGAGATTG AGCTTGAAGG TCATATCATT GACTCAGGCA TCATGACACT TGTCTTCGAC
AGGATCATGG ATATGGGGGG AAACTTTGAG ATTCTCACCT TTGACGTCGG CAAGAAGAAG
ACCGATCCCA GTTATGCCAG GCTTCGTGTG GTGGCCAGCG ATCCAAACCA GCTGGCAGTG
ATCCTGAGCG ACCTGCACCG ATACGGTGCG CGCCAGCTGG AGGTCGATGA TGTCCACCTG
GTCCCAGCCG AGGCTGACCG GGTGGTGCCG AAGGGGTTCT ACTCGACGAC CAACTACCCG
ACTTCGGTCA AGTACCGGGA CCAGTGGCTG CAGGTGGTGG ACAACGAGAT GGACTGTCTG
ATCGTGGTCG ACCCGGCTCT GATGGCAGCC CTCTGCACCC CGCTCTCCAA ACTGAAGAAG
GGCGATCTCG TGGTGATGGG AGAGCAGGGC GTTCGGATCA TCCCGCCAGA GCGCCCCCGT
GAACAGAGCA CATTCGAGTT CATGAACGGG ACTGTATCCC CTGAAAGGCC CAGCGAGACG
CTGATTCGGA ACATCGCCGC AGAGATTAGG GAACTGAAGG CGAAGGGTGG GAAGATTGCG
CTGGTCGGAG GGCCGGCGAT CGTCCACACC GGTGGCGACC TCGCCCTCGC CCGCCTGGTG
CGGGAGGGGT TCATCGATGT GATCTTTGCC GGTAATGCCC TGGCCACCCA TGATATCGAG
TACAACCTGT ACGGCACCTC GCTCGGGATG GACCTCTCCA CCGGCAAACC GGTGGTCGGC
GGTCACAAGC ATCACCTCTA TGCGATCAGC GAGGTGATGC GCGCCGGCTC CATTCGTGCT
GCGGTCGAGC AGGGGGTGAT CACGGGGGGG GTGATGTACG AGTGTATCTC CAACGATATC
CCGTTCGTGC TCGCCGGCTC GATCCGGGAC GATGGGCCGC TCCCGGATGT GATCACCGAT
TCGATGAAGG CGCAGGATGC CATACGTGAA CATCTCCGGG GTTGCGGGAT GGTGCTGATG
GTCGCGACAC TCCTCCATTC GATCGCCGTC GGCAACTGCC TCGGCTCCTC AGTGAAGACG
ATCTGCGTGG ACATCAACCC CTCCTCGGTC ACCAAACTGA TGGACCGCGG CACGATGCAG
GCGATTGGGA TCGTCAGCGA TGCCGGCACC TTCCTGCCCC TCCTCGCAGA ACAGTTGATC
CCGGACTTCC GCACCCGGGT CATCAAACCC GATACGAAAT CGCCGATTCA GACGGTCGAA
TAA
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| Protein sequence | MTAGEPILSS VADIVSMQAS REIELEGHII DSGIMTLVFD RIMDMGGNFE ILTFDVGKKK
TDPSYARLRV VASDPNQLAV ILSDLHRYGA RQLEVDDVHL VPAEADRVVP KGFYSTTNYP
TSVKYRDQWL QVVDNEMDCL IVVDPALMAA LCTPLSKLKK GDLVVMGEQG VRIIPPERPR
EQSTFEFMNG TVSPERPSET LIRNIAAEIR ELKAKGGKIA LVGGPAIVHT GGDLALARLV
REGFIDVIFA GNALATHDIE YNLYGTSLGM DLSTGKPVVG GHKHHLYAIS EVMRAGSIRA
AVEQGVITGG VMYECISNDI PFVLAGSIRD DGPLPDVITD SMKAQDAIRE HLRGCGMVLM
VATLLHSIAV GNCLGSSVKT ICVDINPSSV TKLMDRGTMQ AIGIVSDAGT FLPLLAEQLI
PDFRTRVIKP DTKSPIQTVE
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