| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpal_2124 |
|---|
| Symbol | |
|---|
| ID | 7271604 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanosphaerula palustris E1-9c |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_011832 |
|---|
| Strand | - |
|---|
| Start bp | 2255434 |
|---|
| End bp | 2256726 |
|---|
| Gene Length | 1293 bp |
|---|
| Protein Length | 430 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 643570738 |
|---|
| Product | Phenylacetate--CoA ligase |
|---|
| Protein accession | YP_002467145 |
|---|
| Protein GI | 219852713 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG1541] Coenzyme F390 synthetase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 23 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTTCTGGA ATAAGTCTGT AGAGACGATG GGGCCGGCAG AACTCGCCTC GCATCAGCTC
AAGAAGTTGA AGGAGACGGT ACAGCAGGTC CAGAAGATAC CATTTTACCG TGCCAGGTTC
GAAGAGGCCG GGCTTCGGCC GGAGGCGATC CAGTCACTTG ATGACCTGCA GAAGATCCCG
TTCACGAAAA AGCAGGACCT CCGTGGGGGG TACCCGTTCG GATTCCTCGC CGTCCCTCTC
AGTAAGGTTG TTCGGATCCA TGCCACCTCC GGCACCACCG GGAAACCGAC GGTCGTCGGG
TATACTCGCA ACGACCTGGA AACCTGGTCT GACCTGATCG CACGAAACCT GACGATGATC
GGCCTTGGGG AGGGTGACGT CTTTCAGAAC TCGGTCAACT ACGGTCTCTT TACGGGAGGT
CTCGGTCTCC ATGCCGGGGC CGAGAAGGCA GGGTTGACGG TGGTCCCGGC CGGCACCGGG
AATACCCGGC GACAGATCGA GATGATCCGT GACTTCGGCG TGACCGCGAT CCACTGCACC
CCGGGGTATG CACTGCATAT CGCTGAGGTG GCTGAGGAGA TGGGGGTCAC CCTCGACTCG
CTCAAGACCG GGATCTTTGG GGCCGAGTCC TGGTCCGAGA CGATGCGCCG GGAGCTTGAG
GATCGCCTCG AACTCTCGGC CTATGACTCC TATGGGATGA GCGAACTCTT CGGGCCGGGA
GTGGCCTTTG AATGCCCGGA GAAGGATGGG CTCCACATCT GGCATGACAG TTACCTCGTC
GAGATCATCG ACCCGAAGAC AGGGGAGGTG CTCGGCCCGG AGGAGCGGGG CGAGATGGTG
GTGACCCCAC TCGTCAAGGA GGCGATGCCT CTCCTCAGAT ATCGGACCGG GGATATCACG
ATGCTGATGG AGGACGGGTG CGTCTGCGGC CGGATGAAGA AGATCGCCCG GATCACCGGC
AGGAGTGACG ACATGCTGAT CATCCGCGGG ATCAATGTCT TTCCGTCCCA GATCGAGGAC
GTGCTGCTCG GACTGCCTGA GGTGGGGGAT CAGTTCATGG TCTATGTCGA CCGGAAGAAC
CATCTCGATG AGATGACAAT CGAGGTGGAG ATGAGCCGGG AGTACTTCAG CGGGGAGCTG
CAGGACCTCG CCAGGATCCA GAAGCGGGTG ATGGGTGTCC TTAAGGATAC GCTCGAGTTG
AGGACCACGG TCAGGCTGGT CGAGCCCGGG TCGCTTCCCC GTTTCGAGGG GAAGACGAAA
CGGGTGATCG ATCGGCGGGG GGATCTGATA TGA
|
|---|
| Protein sequence | MFWNKSVETM GPAELASHQL KKLKETVQQV QKIPFYRARF EEAGLRPEAI QSLDDLQKIP
FTKKQDLRGG YPFGFLAVPL SKVVRIHATS GTTGKPTVVG YTRNDLETWS DLIARNLTMI
GLGEGDVFQN SVNYGLFTGG LGLHAGAEKA GLTVVPAGTG NTRRQIEMIR DFGVTAIHCT
PGYALHIAEV AEEMGVTLDS LKTGIFGAES WSETMRRELE DRLELSAYDS YGMSELFGPG
VAFECPEKDG LHIWHDSYLV EIIDPKTGEV LGPEERGEMV VTPLVKEAMP LLRYRTGDIT
MLMEDGCVCG RMKKIARITG RSDDMLIIRG INVFPSQIED VLLGLPEVGD QFMVYVDRKN
HLDEMTIEVE MSREYFSGEL QDLARIQKRV MGVLKDTLEL RTTVRLVEPG SLPRFEGKTK
RVIDRRGDLI
|
|---|
| |