Gene Mpal_2021 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMpal_2021 
Symbolcdc6 
ID7272002 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanosphaerula palustris E1-9c 
KingdomArchaea 
Replicon accessionNC_011832 
Strand
Start bp2142972 
End bp2144096 
Gene Length1125 bp 
Protein Length374 aa 
Translation table11 
GC content60% 
IMG OID643570635 
Productcell division control protein 6 
Protein accessionYP_002467045 
Protein GI219852613 
COG category[L] Replication, recombination and repair
[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG1474] Cdc6-related protein, AAA superfamily ATPase 
TIGRFAM ID[TIGR02928] orc1/cdc6 family replication initiation protein 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.377999 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.256652 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGTAC GACCGTTGAT GTGGGACGAG ACGCTCTTCA AGGACCACGA GGTCTTTGAA 
GTCGACTTCG TCCCCGACGA GATCCACTTC CGCGAGGAGC AGATGCGCGA GCTCGTCTAC
CAGCTCAGAC CCGGGATCTC CGGGTCCCGG CCGCTGAACA CGCTCGTCAA AGGTGTGCCG
GGCACCGGAA AGACGACCAG TGTCAAGAAG GTCTTTTCTG AGATCGAGGA GAGCACCAGG
AAACTGGTCC CGGTCTATGT GAACTGCCAG ATCGACAACA CCCAGTTCGG GATCTTCTCC
CAGATCTACT ACCGGCTCTC CGGCCATCTC CCCCGTTCCA CCGGCCTCTC CTCGAAGCGG
GTCTTCGACT CGATCGGAAA GATCCTGGAG CAGGACGGAA CGGTGCTGGT GGTCGCCCTC
GACGATGCGA ACTACCTGCT CTATGAGAAC GAGATCAACA AGGTGCTCTA CACGCTCCTC
CGGTCCCACG AGGTCTATCC GGATACCAGG ATCGGGGTGA TCACGATCAT CAGCGACCTC
TCGGTGGACC TGATGAGCAG GATCGATCAG CGGGTCCAGT CGGTCTTCCG ACCGAACGAG
ATCTACTTTC CCCCCTACAC CTGTGTCGAG GCCAAACAGA TCCTCTCAGA CCGGGCAGAA
CAGGGGTTCT ATCCGAACGT GCTCCCTGAA GCAGTGCTGG ACCTCGTGGT CGACAGGACG
ATGAATGCCG GCGACCTCCG GGTCGGGATC GACCTCTTAA AGCGGGCCGG ACTGCATGCA
GAGACCGCGG CGCGGCGGGT GATCGAGGAG GGTGATGTCT GTAAGGCCTT CGAGGCCTCC
ACGTCCCTGC ACCTGCTCGC CACGATCCGG ACGTTCAAAG AGGAGGAGAA GGTGCTCCTC
CGGTTGCTCG CAGAGCAGTC ACAACAGGAG AGCGAGATCT CAGTCGGGGA GTTCTCCCGC
TCGGTCGGGG ATAACCTCCC CTATGGCTAT ACCCGGATCT ATGAGATGAT CAGCAAGTTC
GAAGCGATGC ATCTGGTCGA TATCAGATAT CGGGGAGGGC GTGGCCGTTC ACGCCTGCTG
ACCCTCAGGT ACGACCCCCA GTTGGTGCTC GACACCCTGA AGTGA
 
Protein sequence
MTVRPLMWDE TLFKDHEVFE VDFVPDEIHF REEQMRELVY QLRPGISGSR PLNTLVKGVP 
GTGKTTSVKK VFSEIEESTR KLVPVYVNCQ IDNTQFGIFS QIYYRLSGHL PRSTGLSSKR
VFDSIGKILE QDGTVLVVAL DDANYLLYEN EINKVLYTLL RSHEVYPDTR IGVITIISDL
SVDLMSRIDQ RVQSVFRPNE IYFPPYTCVE AKQILSDRAE QGFYPNVLPE AVLDLVVDRT
MNAGDLRVGI DLLKRAGLHA ETAARRVIEE GDVCKAFEAS TSLHLLATIR TFKEEEKVLL
RLLAEQSQQE SEISVGEFSR SVGDNLPYGY TRIYEMISKF EAMHLVDIRY RGGRGRSRLL
TLRYDPQLVL DTLK