| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpal_1974 |
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| Symbol | |
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| ID | 7270780 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanosphaerula palustris E1-9c |
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| Kingdom | Archaea |
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| Replicon accession | NC_011832 |
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| Strand | - |
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| Start bp | 2101046 |
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| End bp | 2101816 |
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| Gene Length | 771 bp |
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| Protein Length | 256 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 643570589 |
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| Product | Xylose isomerase domain protein TIM barrel |
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| Protein accession | YP_002467000 |
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| Protein GI | 219852568 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1082] Sugar phosphate isomerases/epimerases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.520711 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAGAAAC TCTTCTTCGC CTCCTCGTCG AAGGTGATGG ATACCCCTGA ATGGGTCTAC
TCGCTGGAGG AGGCCGGGTA CGACGGCTGG GAGATCATGG CCGACGGGCC GTACCGTCTC
GATGACCCGA AGGCTTTCGC ACAGGTGAAA TCTGTGCTGG AGACGACCGG CCTCGCAGCC
TCGGTCCATG CCCCCTATAA CGACCTGAAC CTGGCCTCGT TGAACTATCC GATCTGGAAG
GAGTCGATTC GACAGATCTC GGCCTGCATC GCCCATGCAG CCGATCTGAC CGATCGGGTC
ACGATCCACC CGGGGTATAT CTCGACGATC GGAGCGCTTG ACCCGCACCG GACCTGGGCC
CTGCAGAAGG AGGCGCTGGT GGAGATCGGG AAGGTGGCGG TGGAGCATGG GGTGCTGGCC
TGCCTGGAGA ACATGATCGG GGTTGCAGAG TTCCTCTGCC GGTTTCCGCT GGAGATCATC
GGCATGACTG AGGGGATCGA AGGGGTGGGG ATCACCTGCG ACCTCGGCCA TGCCAACACG
GCCGGGCAGG TGGGTCCGTT CCTCGAACAC CTCGAGCTGT TCAACCATAT GCACCTGCAC
GACAACCACG GCCTCTCCGA CGAACACCTC GCCCTCGGGG ACGGTTCGAT CGACTGGGCT
GCCATTGGTC CGCAGGTCAA ACGCCGGTAC AGCGGAATCG CCGTCGTCGA GGGACGGTCC
CTGGAGGAGG CACGGCGGTC TGCCGCTGCA TTCCGGCGGT GGTTTGTATG A
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| Protein sequence | MQKLFFASSS KVMDTPEWVY SLEEAGYDGW EIMADGPYRL DDPKAFAQVK SVLETTGLAA
SVHAPYNDLN LASLNYPIWK ESIRQISACI AHAADLTDRV TIHPGYISTI GALDPHRTWA
LQKEALVEIG KVAVEHGVLA CLENMIGVAE FLCRFPLEII GMTEGIEGVG ITCDLGHANT
AGQVGPFLEH LELFNHMHLH DNHGLSDEHL ALGDGSIDWA AIGPQVKRRY SGIAVVEGRS
LEEARRSAAA FRRWFV
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