| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpal_1972 |
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| Symbol | |
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| ID | 7270778 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanosphaerula palustris E1-9c |
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| Kingdom | Archaea |
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| Replicon accession | NC_011832 |
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| Strand | + |
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| Start bp | 2098256 |
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| End bp | 2100121 |
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| Gene Length | 1866 bp |
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| Protein Length | 621 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 643570587 |
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| Product | Radical SAM domain protein |
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| Protein accession | YP_002466998 |
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| Protein GI | 219852566 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1032] Fe-S oxidoreductase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.270598 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.360161 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGACCAGG TCATGAAGAG AGACGAGCGG TGCAGAGGTG CCGGCAGACC GCAACCCGAG
TTTCTGCCGA TGTCAATGAG GGAGGCCAGA AAACTGGGGA TCTCACAGTT CGATGTGATC
CTGATCAGCG GGGACGCCTA CGTGGACCAT CCCTCCTTCG GGACGGCCCT GATCGGGCGG
GTGCTCTGGG AGGCCGGGTA CACCGTCGGG GTGATCGCCC AGCCGGACTG GCACGGTCCG
GACGACCTGA CCGCCCTCGG GAGGCCGCGG CTCTTCTTCT CAGTCTCCTC CGGGAGCGTC
GACTCGATGG TGAACCATTA CACCCCGAAC AAAAAGAGGC GCTCGGAGGA TGTGTACTCC
CCGGGCGGGA GACCCAACCG GCCCGACCGG GCGACGATCG TCTACGCCCA GCAGGTACAC
GCCCTCTTCC CGGAGACGCC CCTGCTGCTC GGGGGGATCG AGGCGAGCCT GCGGCGGTTC
GCCCACTACG ACTACTGGTC CGACTCAATC AGACAGTCGA TCCTCGCCGA CGCCCCGGCA
GACCTGGTCG TCTACGGGAT GGGCGAGCAG CAGATCGTCG CGATCGCAGA CCGGCTGAAC
ACCGGTGAAT CGATCGGGGA GATCATGGAT ATCGCCGGGA CGACTGTGAA GATGGCGCCG
AAGACCTGGC GGGCCACCGA CCCGGGGGAT GCGGTGGTGA TCCCGTCGTA CACCGAGGTC
GCCGGGGATA AACGAGTGTA TGCCGAAGCG TTTCGACTCC ATGCGCTCGA ACAGAACCCG
ATCACCGGCA GACGCGTCGT CCAGCCGCAC TCAAAGACGG TGATCATCCA GAACCCGCCG
GCCCTGCCTC TCTCAACCGA AGCACTCGAT CGAATCTATG CCCTCCCCTT CACAAGGAAG
GCCCACCCCT CGTACACCAC GAAGGTTCCG GCCCTCGAAC CGGTCAGGTT CTCGGTCACC
AGTCACCGGG GGTGCTTCGG GTCCTGCTCG TTCTGTGCCC TGACCCACCA CCAGGGCCGG
ATCATCCAGA GCAGGTCGGT CAGCTCGATC GTCGACGAGG TGACGAGGAT GACCCGGATG
AAGGGCTGGA AGGGGATCGT GCAGGACGTC GGCGGGCCGA GCGCCAACAT GTACGGACTC
TCCTGTCCCC GGTGGTGGAC CCTCGGCCCC TGTGCCGACA GAGCCTGTTC CCCGGACTGT
CTCTCCCTCA CCGTCAGCCA CCAGCAGCAG GTCGAGATGC TCAGCGCTCT TCGGGCGGTG
CCGGGGGTTA GGAAGGTCTT CATCAGTTCC GGAGTCCGGT ACGACCTGGT CCTCGCAGAC
CATTCGACCT ATCTCCAGGA CCTGGTCAGA CACCATGTCT CAGGCCACCT GAAGATCGCA
CCCGAGCACT TCGTCGACAG CGTCACCGCC CGGATGCATA AACCGGGGAG GGCAATCTTC
GAGACGTTCC AGCGTGCCTA CGATAAAACG GTCAGAGAGA CCGGTCTCCG GCAGTACCTG
CTCCCCTACC TGATGTCAGG CCATCCAGGG TGCACGGTCG GAGACATGAT CGAGATGGCC
CGATATATCG AGGATCACCA CCTCTACACC GAACAGGTAC AGGACTTCAC CCCAACCCCG
ATGTCGGTCT CGACCTGCAT GTATGCGACC GGGCTGGATC CGTTCACGAT GAAGCCGGTG
CATGTCCCGA CGGGGCGTGA AAAGCAGATC CAGCGGGCTT TCCTTCGGTA CCGGGACCCC
GCGAACGAGA CGATGGTCAG GGAAGGGCTT GCCCAGACAA AAAGAGAGGA CCTGATCGGA
TCAGGACCGA AATGCCTGCT CCCGGATCAT CGTGCCGGAA AGATGATCGG ATTCAGGCGT
CCCTGA
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| Protein sequence | MDQVMKRDER CRGAGRPQPE FLPMSMREAR KLGISQFDVI LISGDAYVDH PSFGTALIGR
VLWEAGYTVG VIAQPDWHGP DDLTALGRPR LFFSVSSGSV DSMVNHYTPN KKRRSEDVYS
PGGRPNRPDR ATIVYAQQVH ALFPETPLLL GGIEASLRRF AHYDYWSDSI RQSILADAPA
DLVVYGMGEQ QIVAIADRLN TGESIGEIMD IAGTTVKMAP KTWRATDPGD AVVIPSYTEV
AGDKRVYAEA FRLHALEQNP ITGRRVVQPH SKTVIIQNPP ALPLSTEALD RIYALPFTRK
AHPSYTTKVP ALEPVRFSVT SHRGCFGSCS FCALTHHQGR IIQSRSVSSI VDEVTRMTRM
KGWKGIVQDV GGPSANMYGL SCPRWWTLGP CADRACSPDC LSLTVSHQQQ VEMLSALRAV
PGVRKVFISS GVRYDLVLAD HSTYLQDLVR HHVSGHLKIA PEHFVDSVTA RMHKPGRAIF
ETFQRAYDKT VRETGLRQYL LPYLMSGHPG CTVGDMIEMA RYIEDHHLYT EQVQDFTPTP
MSVSTCMYAT GLDPFTMKPV HVPTGREKQI QRAFLRYRDP ANETMVREGL AQTKREDLIG
SGPKCLLPDH RAGKMIGFRR P
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