Gene Mpal_1868 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMpal_1868 
Symbol 
ID7272685 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanosphaerula palustris E1-9c 
KingdomArchaea 
Replicon accessionNC_011832 
Strand
Start bp1983295 
End bp1983852 
Gene Length558 bp 
Protein Length185 aa 
Translation table11 
GC content55% 
IMG OID643570483 
Producthypothetical protein 
Protein accessionYP_002466896 
Protein GI219852464 
COG category[L] Replication, recombination and repair 
COG ID[COG3663] G:T/U mismatch-specific DNA glycosylase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATAGAAG GAAAGCCTGA TCTGATGAAG AGAACCAGCA GTATAAAAGA CTCCGATCCA 
AAGCAGGGTA TCCTTCCAAT AATCGGCTCG GCCCCGGTCG TGCTAGTCCT CGGTTCATTT
CCAAGTGCCC GGGCACGGAC TGTAGGAGAA TATTATGCGA ATCCTCTGAA CCATTTCTGG
CCGATCATCG AGGAACTCTT TGGGATCTCC CGGTCACTCT CGTATTCCGA GAGAGTCCGT
CTGCTCGCTG ATCAGCAGGT GGCGCTCTGG GATATGGTCG ACTCCTGTTA TCAGGAGGGT
TCGATGGACA GTACGATATA TGAGCCGGCT CTGAACGATA TTCGTGGATT TTTGACAACC
CATCCGACCA TCCGCCTGGT CGCAGCCAAT GGGAGGACCG CCGAACGGTT TCTGAAACGG
TCGCTGGGGA AGGCGGGACC GCCTGCCGGT GTGACCGTCA TCTCCCTCCC CTCAACCAGT
CCTGCCAACG CTCGCGAATC CTTTCATCAG AAGGTGCAAC GATGGCGGGT GATCCGGGAC
TCTGCGGTCC CTTCATAA
 
Protein sequence
MIEGKPDLMK RTSSIKDSDP KQGILPIIGS APVVLVLGSF PSARARTVGE YYANPLNHFW 
PIIEELFGIS RSLSYSERVR LLADQQVALW DMVDSCYQEG SMDSTIYEPA LNDIRGFLTT
HPTIRLVAAN GRTAERFLKR SLGKAGPPAG VTVISLPSTS PANARESFHQ KVQRWRVIRD
SAVPS