| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpal_1862 |
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| Symbol | |
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| ID | 7272679 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanosphaerula palustris E1-9c |
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| Kingdom | Archaea |
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| Replicon accession | NC_011832 |
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| Strand | - |
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| Start bp | 1976755 |
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| End bp | 1978611 |
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| Gene Length | 1857 bp |
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| Protein Length | 618 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 643570477 |
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| Product | type II secretion system protein E |
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| Protein accession | YP_002466890 |
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| Protein GI | 219852458 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0630] Type IV secretory pathway, VirB11 components, and related ATPases involved in archaeal flagella biosynthesis |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCAACCA TGACAATGGC AGCGAAGCTG CCATTCAAGC CTGAAGTTGT CGATGAAGGA
ATTGATTGGT CCACCAATCT CGAGTCCAGT GCGCTCTATC GGATGCTCCC TGCGAATGCC
CGGGAATACG TGCAAGGAGC TCCACACCTG CTCGAGTACC TGCATATCCT GCCGGTGAAC
ACCTATGGGA TTCCTCTCTT CTTCTCCGAG TTGAAGAAGG ACCTTCGATC GATGAAGAAC
CCGAACATCA TCTATCCTGT CAATGAAACC ACCTTTGTCC ATATTCTACA GGATCCGAAT
GATGTCCGAA ACTTCTATAT CCCCATCGAG CCGTCGTTCC TGCACAATGT GAACAAATTT
GTTCCACCCA TCGAACTCAG GCTGATCGAT CTGATCGATG CCCTTGAGAA CGACCCCTCC
TCTCAGGAGG AGCGTCGGAT TGTCCTCAAG AATCTGCTCA CCAAGGTGAC GGCGATCCGG
CGTCCCGGTG AGATACTCGA AGAGTCGAGC GGGGAGGATG TTCAGAAGGG GGGTCTTGAG
AAGGTCAAGG ACTTTCTGAA CACCGATTTC ACTGCGAAGA AGAAGATGAT CGATCGGATG
TCGCAGGTCA AGGTGCCTCA GACCCCGGAT GGAAGGGTGA TCCTGACCCC CATCGAGTAC
AAGGCGGTGG AGTACCTGAT GGCACGGGAT AAGATCGATA TGGGGGTGCT CCAACCGTTC
CTTTCAGACT CGAATATCGA AGATATCACC TGTAACGGGG TCGGTCCGAT CTTCATCGAG
CACAAGGTCT TCAAGGGTTT GAAGTCAGTG ATTGAGTTCA CCCGTTCTGA TGAACTCGAC
CAGTTTGTGA TCAAGATGGC AGAGAAGATC AAGCATCCGA TCACCTATCG GAACCCGATT
GTAGATGCTA CCCTGTTGGA TGGTTCCCGT ATCAACATCG TCTATGGAAC TGCAGTGAGC
CGGCACGGTT CGAACTTCAC GATTCGTAAG GTGAATGAAG TGCCGCTTTC TATCATGGAT
GTGATAGCTT CGAATGCCTG TGACTATAAT ATGGCGGCTT ATCTCTGGAT CTGCATCGAG
TATGGAATGT CCCTCTTCGT CAGTGGCGAG ACTGCCAGTG GGAAGACCAC GACCCTGAAT
GCGATCACGA CGTTTATTCC TCCGGAGAAC AAGATCGTGA CGATCGAGGA CACGCCAGAA
CTGACGGTCC CGCACAGGAA CTGGACCCGC GAGGTTGCTA AAGCCAAGGG AGGGGAGAGT
GACGATGGTT CGGTCACCAT GTTCGATCTC CTCAAGGCCG CCCTCCGTCA GCGTCCGAAC
CAGATCCTGG TCGGTGAGAT CAGAGGTTCG GAGGGGTCAG TCGCGTTTGG TGCGATGCAG
ACCGGTCACC CGGTGATGTC CACCTTTCAC GCGGCCAGCG TCGAGAAGTT GATCCAGCGG
CTCTGCAGTG ACCCGATCAA CATCCCCAAG TCGCATGTGG ACAACCTGAA CCTGGTGATC
ATCCAGAGTG CGGTGAGGCG TCCGACCGGC GAAACCGTCA GGCGGGTCCT CAGTATCAAT
GAACTGGTCG GCTTTAATCC GGAGACGCAG GGTTTCTCAT TTGTGCAGAT GTTCGGCTGG
GAACCGGTCA CTGATACATT CACCTGGTCA GGAAAGGGTT CTTCGTACCT GCTGGAAGAG
AAGATCGCAA CGATGCTCGG GTTGCCCGAG AATCGACGTG CAGAGATCTA TCTGGAGGTC
GAAAAACGGG CAAAGATCCT TGAGAGACTC CATCAGGCAG GGTATACCCA GTTCTGGGAT
CTGTTCCATA TGATCACCAA GATCAAGAAG CAGGGGTTGC TGGCGATAGG GGTCTGA
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| Protein sequence | MATMTMAAKL PFKPEVVDEG IDWSTNLESS ALYRMLPANA REYVQGAPHL LEYLHILPVN
TYGIPLFFSE LKKDLRSMKN PNIIYPVNET TFVHILQDPN DVRNFYIPIE PSFLHNVNKF
VPPIELRLID LIDALENDPS SQEERRIVLK NLLTKVTAIR RPGEILEESS GEDVQKGGLE
KVKDFLNTDF TAKKKMIDRM SQVKVPQTPD GRVILTPIEY KAVEYLMARD KIDMGVLQPF
LSDSNIEDIT CNGVGPIFIE HKVFKGLKSV IEFTRSDELD QFVIKMAEKI KHPITYRNPI
VDATLLDGSR INIVYGTAVS RHGSNFTIRK VNEVPLSIMD VIASNACDYN MAAYLWICIE
YGMSLFVSGE TASGKTTTLN AITTFIPPEN KIVTIEDTPE LTVPHRNWTR EVAKAKGGES
DDGSVTMFDL LKAALRQRPN QILVGEIRGS EGSVAFGAMQ TGHPVMSTFH AASVEKLIQR
LCSDPINIPK SHVDNLNLVI IQSAVRRPTG ETVRRVLSIN ELVGFNPETQ GFSFVQMFGW
EPVTDTFTWS GKGSSYLLEE KIATMLGLPE NRRAEIYLEV EKRAKILERL HQAGYTQFWD
LFHMITKIKK QGLLAIGV
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