Gene Mpal_1720 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMpal_1720 
Symbol 
ID7271283 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanosphaerula palustris E1-9c 
KingdomArchaea 
Replicon accessionNC_011832 
Strand
Start bp1791459 
End bp1792331 
Gene Length873 bp 
Protein Length290 aa 
Translation table11 
GC content60% 
IMG OID643570334 
Productcobalamin biosynthesis protein CbiG 
Protein accessionYP_002466750 
Protein GI219852318 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG2073] Cobalamin biosynthesis protein CbiG 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCAGGA CCGTGGTGAT CGCGCTCCCC CGCTTCAGCG GAGAGGCGGC GATGATCGCC 
AGGTTTCTCG ATGCAGACCA CCGTGACTAC GTTGCCGGCG TCTTTGCAGA GGTCTGGGGA
GTTTACAACC GGATCGTGGC GGTGATGTCC GCCGGGATCG TGGTCAGGCA GGTGGCCCCC
CTCCTCAAGG ACAAGTGGCA GGACCCAGCG GTGGTCGTGG TCAGCCCAGA CCTTCGGTAT
GCAATTCCCC TGGTCGGAGG GCATCACGGT GCCAACGACC TTGCCAAGAA ACTTTCAAAA
GCCGGCCTTC TGCCGGTACT GACGACCGCG ACCGAGTCCC TCGGCCTTCC GTCGGTCGAG
GGGATCGCTA CAGCCCGACA ATGCGATGTC GTGAACCGTC CTTCGACCAG GACCGTCAAT
GCGGCGATCC TTGAACGTGA TGTCCCGGTC TATCGTATCG ATGGACCTGC GATCGTGATT
GCGGGACCAG CGGTCTCGTT TCTGGTCGCT TCAGGCGAGT ATGTGGTCGG GATCGGATGC
CGGCGGGGGG TTACGCCCCT GGAGGTGCAG CAGAGTGTTG AAGAGGCCCT GTCAGCGGCT
GGGATAGCAG TTGATGACGT CCGTTGTTAT GCCACGACCG TCCAGAAGAG AGACGAGGCA
GGACTGATCG ATGGGGTCTT CGCCATGGGT GGCGATCTGA TCTTTCTGGA TGACCAGACG
ATCAATGCCG AGTCTCCCCC GAGCAGGTCC GGGGCTGACA GGATCGGGCT TGTCGGGGTC
GCAGAGCCTG CTGCGCTGGC ATTATCAACG AAGAGAGAGA TGATCATGGA GAAGAAAGTG
TATGGGAGAG TTACGATTGC CATTGCACGC TGA
 
Protein sequence
MTRTVVIALP RFSGEAAMIA RFLDADHRDY VAGVFAEVWG VYNRIVAVMS AGIVVRQVAP 
LLKDKWQDPA VVVVSPDLRY AIPLVGGHHG ANDLAKKLSK AGLLPVLTTA TESLGLPSVE
GIATARQCDV VNRPSTRTVN AAILERDVPV YRIDGPAIVI AGPAVSFLVA SGEYVVGIGC
RRGVTPLEVQ QSVEEALSAA GIAVDDVRCY ATTVQKRDEA GLIDGVFAMG GDLIFLDDQT
INAESPPSRS GADRIGLVGV AEPAALALST KREMIMEKKV YGRVTIAIAR