| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpal_1714 |
|---|
| Symbol | |
|---|
| ID | 7271277 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanosphaerula palustris E1-9c |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_011832 |
|---|
| Strand | + |
|---|
| Start bp | 1785653 |
|---|
| End bp | 1787479 |
|---|
| Gene Length | 1827 bp |
|---|
| Protein Length | 608 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 48% |
|---|
| IMG OID | 643570328 |
|---|
| Product | K potassium transporter |
|---|
| Protein accession | YP_002466744 |
|---|
| Protein GI | 219852312 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG3158] K+ transporter |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 1 |
|---|
| Plasmid unclonability p-value | 0.00063361 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | decreased coverage |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 13 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCTGAAG AGCATGGTAA TAGTGAGCAG GGTATAGGTG GGATCATCAA AGCGATGGGT
CTCGTCTTCG GGGATATTGG AACCAGTCCG ATCTACACTC TCTCAGCGAT ATTCCTGCTG
ACAAAACCAA CGGTTGAGAA TGTGCTCGGG ATCATCTCGC TGATCATCTG GACTCTGATT
CTGCTGATCA CCATCCAATA CGCCTGGCTT GCAATGAGCC TTGGACGGAA AGGTGAAGGG
GGAACCATTG TACTCCGCGA ACTGCTGGTT CCACTGCTCA AGAAGGGACG TGCCATCACC
GTTGTGACGA TGATGACCAT TATTGGAATC TCGCTCTTCA TTGGCGATGG TGTGATCACC
CCAGCCATCA GTATCCTGAG CGCTGTCGAA GGGCTAGCCC TGATCCCTGG TCTTGAAATG
ATCGATCAGA ATATACTGAT CCTGATCGCA GCCGTGATCG CCATCATGCT CTTCTCATTT
CAGAAGCGTG GAACCGAACG GGTAGCCTGG ACATTTGGAC CGATCATGGT CATCTGGTTT
TCAGTTCTGA CACTAACAGG CATTATCTCG CTGATTAAGA TTCCATCCAT CATCTTCGCT
ATCAACCCAA TCCTGGGCTG GCAATTTTTG ACAGGAAACG GGATCTCAGG CTTTTTAATC
CTCTCTTCAG TGATCCTCTG TGCAACGGGC GGCGAAGCCC TCTATGCTGA TATGGGGCAC
CTGGGGAGAG AACCAATCAG AAAAGCCTGG TATTTTATCT TCTTTGCTCT GATTTTGAAT
TATCTGGGGC AGGGGTCATT CATTCTCCAG AATCCCGGAG CAAAGAGCAT CCTCTTTGAC
ATGGTCTTTG CTCAATCCCA CCTGTTATAC ATCCCATTCC TGCTACTCAG CATTGCAGCA
ACGGTGATCG CCTCACAGGC GATGATCAGC GGGATCTTCT CGATCGTATA CCAGGGAATC
AATACCCATA TCCTTCCAAT AATGAAGATC GACTACACCT CCAGCGAGTT GAGATCGCAG
ATCTATATCG ATGTGATCAA TTGGTTGTTG CTGTTCTCGA TCCTGTTTGT GATGGTTATC
TTCCGATCTT CATCCAACCT GACTGCAGCA TACGGACTCG CGGTAAATGG TACAATGATG
CTAACAGGGA TCATGATTAC GAGTATCTTC TTCCTGCGTG GATCGTACCT GAAGTCAACG
ATCGCCTGGT TTGTGACGAT CATCGATATC GCATTTTTAA TCGCAAACAT CCATAAGATT
CCAAGCGGTG CCTACTGGTC ACTGATCATT GCGATGGTTC CGTTTATGAT CATCATGATC
TACATGCAGG GTCAGAAAAA TCTGTACAAG GCATTAAAAC CGATCCCACT CACGGTTTTC
TTGCATCAGT ACAATGAGAT CTACCACACC ATGAATAAGA TCAGCGGGAC CGCCCTCTTC
TTTGCCCGGG ATTTCCACAA TATTCCGCCA TACATGGCAC TGACGATCTT CAAGAACAAT
ATTATCTACC AGGATAACAT CATCATCTCG ATCGTTACCG GGGACTATCC CTTCGGTATA
GAAGGGGCCT TCAAGAAGAA CCTGGCCGAT GGGCTCAGGG TCTATGAGAT CAGAATGGGG
TATATTCAGG TCGTGGACGT GGTCAAACTC TTCAAAGAGG CTAAAATAGA TGAGAAGACC
ATTTTCTATG GGATCGAGGA TATCGTCCCG AGCAACCTGA TCTGGAAGAT CTTTGCGATC
ATCAAGCGTC TGACCCCGTC ATTCGTCCAG TTCTACAAAC TCCCGGCAGA TAAGATCCAT
GGCGTCGTCA CCAGGATCGA GATGTGA
|
|---|
| Protein sequence | MSEEHGNSEQ GIGGIIKAMG LVFGDIGTSP IYTLSAIFLL TKPTVENVLG IISLIIWTLI
LLITIQYAWL AMSLGRKGEG GTIVLRELLV PLLKKGRAIT VVTMMTIIGI SLFIGDGVIT
PAISILSAVE GLALIPGLEM IDQNILILIA AVIAIMLFSF QKRGTERVAW TFGPIMVIWF
SVLTLTGIIS LIKIPSIIFA INPILGWQFL TGNGISGFLI LSSVILCATG GEALYADMGH
LGREPIRKAW YFIFFALILN YLGQGSFILQ NPGAKSILFD MVFAQSHLLY IPFLLLSIAA
TVIASQAMIS GIFSIVYQGI NTHILPIMKI DYTSSELRSQ IYIDVINWLL LFSILFVMVI
FRSSSNLTAA YGLAVNGTMM LTGIMITSIF FLRGSYLKST IAWFVTIIDI AFLIANIHKI
PSGAYWSLII AMVPFMIIMI YMQGQKNLYK ALKPIPLTVF LHQYNEIYHT MNKISGTALF
FARDFHNIPP YMALTIFKNN IIYQDNIIIS IVTGDYPFGI EGAFKKNLAD GLRVYEIRMG
YIQVVDVVKL FKEAKIDEKT IFYGIEDIVP SNLIWKIFAI IKRLTPSFVQ FYKLPADKIH
GVVTRIEM
|
|---|
| |