Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mpal_1666 |
Symbol | |
ID | 7271981 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methanosphaerula palustris E1-9c |
Kingdom | Archaea |
Replicon accession | NC_011832 |
Strand | - |
Start bp | 1716153 |
End bp | 1718918 |
Gene Length | 2766 bp |
Protein Length | 921 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 643570279 |
Product | UvrD/REP helicase |
Protein accession | YP_002466701 |
Protein GI | 219852269 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0210] Superfamily I DNA and RNA helicases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.921097 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTGACCC CTGAGCAGAA ACGGGCGATC GCGTTTCGCG ACGGAAACCT GCAGGTGATC GCCTGTGCCG GCTCGGGTAA GACCGAGACG ATCACCCGGC GCATCGCGGG TCTCGTCGCC GGGGGCGTGG ATCCACGATC TATCGTTGCC TTCACCTTCA CTGACCGGGC TGCAGCGGAG ATGGCCGATC GCCTCCGTCT CCACCTGCAG ACACTGGTCC CGGGGGAACC TGACCTGGCC GGCCTCTCTG TCGGCACCAT CCATGCTTAC TGCGATCAGC GACTGAAAGA GGTTCTGCCG AGGTACCGAT CCTTCGACCT GCTCGACGAT GATATGCGGC CGCTCTTCTG TTCCCGTTAC TACCATGACT TCGGTTTCGA GGACCTCCTC GTCCATTACC AGGACCGGCG CCGCGAGCCG TCGCGGTATG AAATCATCCA TGACTTCTGC AGGAATGCCG ATCTGGTCAG GGACGAGCGA ATCGATCCGG CCGGTCTTGG TTTGCCCTTC TGCGAGTGTT ACCGCGCCTA CCTCGACCAC CTTCAAGCAG ACCATTACAT CGACTTCACC GGGATGATTG CCCATTATGT CGAGGCGCTC GAAGAGGACC CCGCCCTGCT CGCCCGTGAG AGGGGACGGG TCCGGTACCT GATCGTCGAC GAGTACCAGG ACATCAACAC TCTTCAGGAG GAACTGATAC GCCTGATGGT CGGCAGCACC GGGAACCTCT CCGTCGTCGG CGATGACGAC CAGTGTATCT ACCACTGGCG GGGCTCGAAC TATGAGAATA TCATCTCGTT CGGCACCCGG TACCCCGACG TCACGACCGT CCGTATCCAG CAGAACTTCC GGTCGACCCC GGGGATCATC AGTGCCGCAT CCCGGGTGAT CGATCGAAAT GAACTCAGGC TGCCCAAGAT GATGGAGCCC TGGCCCGAGG GGTTGGGGCA GACCGAGGAG GGCGACATCG CCACCTGCTT CTTCGACGAT GAAGAAGAGG AAGTGGCAGG GATCGTCGGG CAGATCCAGG CACTCCTGGG TCGGGAGTAT ATCAATAATC AGGGCGAAGA GCGAACACTC TCCTATCGTG ACATGGCGGT GTTGATGCGT TCTGTCCGGG TGTATGCCCG TTCTCTCATC TCCGCTCTGG AGAGGGCCGG GATCCCCTTC GTCGTCAGGG GAGGTCGGCT CTTTGAACGG CCTGAGGTCG TGATCGTGAT GCAGGCCCTC GCCTTCCTCG GTGAATACCC CTATCCCCTC AGAAGCCCGG TTCCAGTGCA CCTCCCCCTC CTCGAGGAGG CATACCTGGC GCTTGGTTAT GGGGAGGCGG CCGACTGTGC ATTGTTCCTG AAATTGATGA CGGACCTGAA GCGGGAGATC GATCGAAGCG AGTCATTCAG TCTGCAGACG CTCTTCCACC GGGTGGTGCA GGCCATGGGG GGTGATCGGA CCCCTTTCCC TGAGGTCTGG TATTACAACC TCGGCAATCT CTCGCAACTG GTCTCTGCAT TCGAGCACCA GTATCCTCTG ATAACTACGA TGGAGATCCA CCGTTTCCTG GAGTACATTC AGGAGCATGC GATGAAACAG GCTGAGGAGG GCGGGGCAGG GGAGGAACTC CTCCCGGATG CGGTGACCGT CACCACACTC CACAAGGCCA AGGGCCTCCA GTTCCCGGTC GTCTTCATCC CCCGACTGAA CACCGGCGAG TTCCCCTCGG ACCGGCCGGA CCGGGCGGTC TGGTTTGTGC CGTCGCCCCT CTTCGACCGA GATCGGTATA CCACCAGCCT TGAAGACGAG CGACGGCTCT TCTATGTTGG CATCACCCGG AGCGAGAAGT ACCTCTTCCT CTCCGGCCAT CGGCAAAGAT CCGGGGACCT TCCTCCTGCA GAACCGTCGA CCTTCTTCTC TGAATACCCC CGTGACCATG TCGTCGATCG CTTTCCTTGC CCAGCCAAGG GCGGGGAGAC CAGCCATACT GCTACTCCAA TATCGGATCG ATCGCCGGCC CGGATTGAGA CGAGCTGGTC GGCCCTTCGG TATTATGCCC ACTGTCCGTT CGACTACAAA CTCCGGCACC TCTACGGGTT CGATCCGATG CCCAGGGAGG AACTGGGTTT CGGGCGGGCC GTCCACTCGG TGCTTGCAGC CGTGCATACA CAGATAGTCA GAGGAACGTT CGATCCCGCA GAGATCCCGG ATCTGGTCGA TGAGCACCTG CTCCTCCGCT TCGCCCCGGC GGGGACGACC GAGCGGGTGC AGGGGATCGT CGCCAGGCAG ACCCTTCGCT ACGTGGAACA GAACAGCCAT GACTTCGCCC GGATCGCCGG TATCGAGCTG CCGTTCTCGT TCGCTGTTGG GAATGGCGTG GTGAACGGGG CGATGGACCT CATGCTCGGC GATGGTGACG GCGGGGTTGA ACTCCGAGAC TTCAAACTGA CTGAGGAGGG GGAGGCCTCG TTTCGTCCCG ATGTCGAGCG GCAGCTCCAG GTCTATGCTC TGGCTGCCCG GTCGCTTGGT CACGAGGTAC ACAAGGCGAC GATCTATCAC TTCGATACCG GTTCGATCAC TGAGGTGGCG GTGGGGCCGG CAGCACTCGC CGAGGCGCAA ACTGCCGTGG AGAGGATGAT TGTCGGGATC CAGAACCAGG AGTTCCCCCG ACGGCCGGCA GCAGATCGGT GCGCGAACTG CGATTGGCAC TGCCTCTGCG ACGAGACTGA AGCGTGTGCT GCAGAACTTC ACACGGTGAA GACGGATGAT TGTTAG
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Protein sequence | MLTPEQKRAI AFRDGNLQVI ACAGSGKTET ITRRIAGLVA GGVDPRSIVA FTFTDRAAAE MADRLRLHLQ TLVPGEPDLA GLSVGTIHAY CDQRLKEVLP RYRSFDLLDD DMRPLFCSRY YHDFGFEDLL VHYQDRRREP SRYEIIHDFC RNADLVRDER IDPAGLGLPF CECYRAYLDH LQADHYIDFT GMIAHYVEAL EEDPALLARE RGRVRYLIVD EYQDINTLQE ELIRLMVGST GNLSVVGDDD QCIYHWRGSN YENIISFGTR YPDVTTVRIQ QNFRSTPGII SAASRVIDRN ELRLPKMMEP WPEGLGQTEE GDIATCFFDD EEEEVAGIVG QIQALLGREY INNQGEERTL SYRDMAVLMR SVRVYARSLI SALERAGIPF VVRGGRLFER PEVVIVMQAL AFLGEYPYPL RSPVPVHLPL LEEAYLALGY GEAADCALFL KLMTDLKREI DRSESFSLQT LFHRVVQAMG GDRTPFPEVW YYNLGNLSQL VSAFEHQYPL ITTMEIHRFL EYIQEHAMKQ AEEGGAGEEL LPDAVTVTTL HKAKGLQFPV VFIPRLNTGE FPSDRPDRAV WFVPSPLFDR DRYTTSLEDE RRLFYVGITR SEKYLFLSGH RQRSGDLPPA EPSTFFSEYP RDHVVDRFPC PAKGGETSHT ATPISDRSPA RIETSWSALR YYAHCPFDYK LRHLYGFDPM PREELGFGRA VHSVLAAVHT QIVRGTFDPA EIPDLVDEHL LLRFAPAGTT ERVQGIVARQ TLRYVEQNSH DFARIAGIEL PFSFAVGNGV VNGAMDLMLG DGDGGVELRD FKLTEEGEAS FRPDVERQLQ VYALAARSLG HEVHKATIYH FDTGSITEVA VGPAALAEAQ TAVERMIVGI QNQEFPRRPA ADRCANCDWH CLCDETEACA AELHTVKTDD C
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