| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpal_1624 |
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| Symbol | |
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| ID | 7272166 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanosphaerula palustris E1-9c |
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| Kingdom | Archaea |
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| Replicon accession | NC_011832 |
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| Strand | - |
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| Start bp | 1670784 |
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| End bp | 1672358 |
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| Gene Length | 1575 bp |
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| Protein Length | 524 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 643570237 |
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| Product | beta-ribofuranosylaminobenzene 5'-phosphate synthase family |
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| Protein accession | YP_002466659 |
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| Protein GI | 219852227 |
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| COG category | [H] Coenzyme transport and metabolism
[R] General function prediction only |
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| COG ID | [COG1907] Predicted archaeal sugar kinases
[COG3161] 4-hydroxybenzoate synthetase (chorismate lyase) |
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| TIGRFAM ID | [TIGR00144] beta-RFAP synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.931737 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.205569 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCAGCCT CAAATCTCCT ATCGATGCTC AAGGAACTGG AACAGTCCAG CCCGGTCTCC
CCCCTCCAGA AGATCCTTCT CCTCACGGAC GGATCGGTCA CCAATCTCCT CGAGGTGGTG
GCCGGCGAGC CAATCGAGGT GCATACCCTC GCCCAGCAGG TGGTGCGAGC AGACCGCGAC
GAGGCGGCGG ACCTGGGGAT CGAGGCCGGC GACCTGATCA ACTTCCGGGT TGTGGACCTG
GTCGGTTCGG AGAGTACACG GACCTATGTC CACGCCATCT CTCACACCCC GCTCGATCGC
CTCGGACCCG AGTTTCGGGA CGACCTGATG GCCGCCGATA TCCCGATCGG CAGGATACTC
CAGCGGTACC ATATGGAGAC CAGGCGGGAG ATCCGGGATA TCCGCTCGAT CCGTGCCGAC
AGAAACCTCT CCCGCACCTT CGATGCCCCG GCTGAGTCCG TCCTCTTCTC CCGGCGGTAC
TGTATCGTTC ACGAGCAGCA GCCGCTGATC TTCATCGAGG AGATCTTCTC GCCGGCGCTC
TGGGAAGGGG TCTGGATCTC CGGCCAGGTC GGCGCCGCGT TACCGACCCC AGCGGAGGAG
CAGAGCATCC GGGTCGAGGC TCCGTCGCGG CTCCACCTGG GGCTGATCGA TATGCACGGC
GGGCTCGGGC GGGTCGACGG CGGGATCGGG ATCACTCTGA TGAACCCCTG CACCGGCATC
GAGGTGAAGA GGGGGGAGGA CCTCACCGTC ACGGGCGGTA CCCCCGAGGT CCACCGGCGG
GTGCTCGAGG CAGCCAGGAA GGTGCTGAAT GCGGCTGGTA TCCGGGGTGG CGCCGCGATC
ACGGTGAAGC GATCGATGCC GCAGCACACC GGCCTCGGGA GCGGGACCCA GCTCGCTCTG
GCCACCGGGG CGGCCGTCTC CAGGCTCTAT AACCTGAACC TCTCTGTCAG GAGGATCGCG
GCGATCGTGG GACGGGGCGG GACCTCGGGG ATCGGGACGG CGGCCTTCGG GCATGGGGGA
TTCATCCTGG ATGGCGGGCA CAGCTTCGGC CCGCATGGTG AAAAGCACGG GTTTCAACCA
TCGTCTGCGT CGACGGCGGT GACCCCTGCA ACGGTCTGCG CCCGGCTCTC CTTCCCGGAA
GCCTGGAAGA TCGTCCTCGC GATCCCCAAT AAGGGGACGA ATGTCGAGGG TGCACAGGAG
GTGAACATCT TCCGGGACTA CTGCCCGGTC CCGATCGAGG ACGTCCGGCA GATCTGCCAC
GAGATCATGA CCCGCATGCT CCCCGGCATC GCTGAGGAGG ACCTGGGCCT CTTCGCCGAT
TCAGTGAACG CGATCCAGAC CCTCGGGTTC AAGAAGGTGG AGACGAGCCT GCAGGATCCG
GTGGTGCCGG CCCTGATCCG CGAACTCAGG CAGGCAGGGG CGGCGTGTGC CGGCCTCAGT
TCCTTCGGCC CCACCGTCTA CGCGATCACC TATGGCGACC TCGCCGGCAT CACTCATGCA
GCAACAGAGA CCTTCGGCGA GCAGGGTGGA GAGGTGATCG TCACCAGGGG CAGGAACCAT
GGGGCGGTCT ATTGA
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| Protein sequence | MSASNLLSML KELEQSSPVS PLQKILLLTD GSVTNLLEVV AGEPIEVHTL AQQVVRADRD
EAADLGIEAG DLINFRVVDL VGSESTRTYV HAISHTPLDR LGPEFRDDLM AADIPIGRIL
QRYHMETRRE IRDIRSIRAD RNLSRTFDAP AESVLFSRRY CIVHEQQPLI FIEEIFSPAL
WEGVWISGQV GAALPTPAEE QSIRVEAPSR LHLGLIDMHG GLGRVDGGIG ITLMNPCTGI
EVKRGEDLTV TGGTPEVHRR VLEAARKVLN AAGIRGGAAI TVKRSMPQHT GLGSGTQLAL
ATGAAVSRLY NLNLSVRRIA AIVGRGGTSG IGTAAFGHGG FILDGGHSFG PHGEKHGFQP
SSASTAVTPA TVCARLSFPE AWKIVLAIPN KGTNVEGAQE VNIFRDYCPV PIEDVRQICH
EIMTRMLPGI AEEDLGLFAD SVNAIQTLGF KKVETSLQDP VVPALIRELR QAGAACAGLS
SFGPTVYAIT YGDLAGITHA ATETFGEQGG EVIVTRGRNH GAVY
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