Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mpal_1617 |
Symbol | |
ID | 7272159 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methanosphaerula palustris E1-9c |
Kingdom | Archaea |
Replicon accession | NC_011832 |
Strand | - |
Start bp | 1665115 |
End bp | 1665468 |
Gene Length | 354 bp |
Protein Length | 117 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 643570230 |
Product | transcriptional regulator, HxlR family |
Protein accession | YP_002466652 |
Protein GI | 219852220 |
COG category | [K] Transcription |
COG ID | [COG1733] Predicted transcriptional regulators |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.19292 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGATACCA CGCAGAAAAA ATACAAGTAC AACTGGGGAA TCGAGGCAAC CCTGGATGTG ATCGGGGGCA AATGGAAACC GCTGGTCATC TATCAACTCA AGGACGGGAC GTTGCGTTTT AACCAGATCG TGAGCAAGGT AACGCCCAGG ATCACTCAGA GGATGCTGAC AAAAGAGCTC CGCGAACTTG AAAAAGATGG CCTGGTCACC AGAACGGTGT ACGCCCAGGT CCCGCCGAAG GTGGAGTATT CACTCACCGA GACCGCACAA TCCCTCATCC CGATCCTTGA CCAGCTCTGT GACTGGGGAT ATGAACACAT GAATGACGAC ATCGAGTTCA AGTGTGAGGA ATAA
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Protein sequence | MDTTQKKYKY NWGIEATLDV IGGKWKPLVI YQLKDGTLRF NQIVSKVTPR ITQRMLTKEL RELEKDGLVT RTVYAQVPPK VEYSLTETAQ SLIPILDQLC DWGYEHMNDD IEFKCEE
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