Gene Mpal_1617 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMpal_1617 
Symbol 
ID7272159 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanosphaerula palustris E1-9c 
KingdomArchaea 
Replicon accessionNC_011832 
Strand
Start bp1665115 
End bp1665468 
Gene Length354 bp 
Protein Length117 aa 
Translation table11 
GC content51% 
IMG OID643570230 
Producttranscriptional regulator, HxlR family 
Protein accessionYP_002466652 
Protein GI219852220 
COG category[K] Transcription 
COG ID[COG1733] Predicted transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.19292 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATACCA CGCAGAAAAA ATACAAGTAC AACTGGGGAA TCGAGGCAAC CCTGGATGTG 
ATCGGGGGCA AATGGAAACC GCTGGTCATC TATCAACTCA AGGACGGGAC GTTGCGTTTT
AACCAGATCG TGAGCAAGGT AACGCCCAGG ATCACTCAGA GGATGCTGAC AAAAGAGCTC
CGCGAACTTG AAAAAGATGG CCTGGTCACC AGAACGGTGT ACGCCCAGGT CCCGCCGAAG
GTGGAGTATT CACTCACCGA GACCGCACAA TCCCTCATCC CGATCCTTGA CCAGCTCTGT
GACTGGGGAT ATGAACACAT GAATGACGAC ATCGAGTTCA AGTGTGAGGA ATAA
 
Protein sequence
MDTTQKKYKY NWGIEATLDV IGGKWKPLVI YQLKDGTLRF NQIVSKVTPR ITQRMLTKEL 
RELEKDGLVT RTVYAQVPPK VEYSLTETAQ SLIPILDQLC DWGYEHMNDD IEFKCEE