| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpal_1607 |
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| Symbol | |
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| ID | 7272149 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanosphaerula palustris E1-9c |
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| Kingdom | Archaea |
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| Replicon accession | NC_011832 |
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| Strand | - |
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| Start bp | 1653483 |
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| End bp | 1655087 |
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| Gene Length | 1605 bp |
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| Protein Length | 534 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 643570220 |
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| Product | CRISPR-associated protein, Cse1 family |
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| Protein accession | YP_002466642 |
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| Protein GI | 219852210 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | [TIGR02547] CRISPR system CASCADE complex protein CasA/Cse1 |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.982851 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTAAACC TGATCGAACA GGCATGGATT CCAGTGATCC GAAAAGATGG AGAGCGATCA
ACGATCGCCC CCTGGGAACT GACTAGCGAC TATCAGGAGA ATCCTATCGT CGAACTGGAT
GCACCGCGGC CGGATTTCAA TGGCGCATTG GTCCAGTTTC TGATCGGTAT CGTCCAGACA
GAGCTCCCTC CAACGAATCC CGTGACATGG AAGCGGATGT TCCGGAGACC TCCTGAACCT
GCAGATCTGA AAGCGTCGTT CAGTACACAT ATAGAGGCGT TCAACCTTGA CGGGGACGGG
CCACGGTTCA TGCAGGATCT GACCCTTGCG AAGGGGGAAG CACTCGCGAT CGATAAACTG
CTGATCGAAA GGCCGGGAGA GCAGACCGTC AAGAAAAACA CCGATCATTT CCTTAAACGA
GGAGGGATCG ATCACCTCTG TATGACCTGT GCCGCAATGG CACTCTTCAC CTTGCAGACC
AATGCCCCAT CTGGAGGAAG GGGGCATCGG ACCTCATTGC GGGGGGGAGG ACCCCTGACC
ACTCTTGTCA CCGGAAGAAC ACTCTGGGAG ACTGTCTGGC TGAATGTGAT CTCACCTCAG
GAACTGGAAC GTTACGGCAA CAGTGCCCTG ACCAGTGCAG CCGATATCTT TCCCTGGATG
GGGGAGACCA GGACCAGCAA CAACAATGAG ATCACGACAC CCCAGGATGT GAATCCTGCC
CAGATGTTCT GGGGAATGCC GCGGAGGATC CGACTCGACC TCGATGGAAA ACCAGAACCC
GGTGAATGTG ATCTCTGTGG AAAAACCACC GAAAGACAGG TCAGTACGTT TTCTGCGAAG
GATAGCGGTG TCAATTACAA GGGTGGATGG TGCCATGTGC TCTCTCCATA TTCGACCAAC
CCCAAGGGAG AACTGCTGGC CAAGCATGCC CAGCCCGGTG GAGTCACCTA TCGGAACTGG
CTGGGACTGG TCCAGAACGA TTCACAGAAC AACAGCCAGC CGGCCGCAGT GGTCTCACTC
TTCCGGGAAC AGCGTCAGCT GGGACTCAAT GGGTTTCAAC CACACCTCTG GGCCTTCGGA
TATGACATGG ATAACATGAA AGCACGCTGC TGGTACGAAG GGAAGATGCC GCTCCATCAT
ATCGACGAGG GACTCTTGCC CGGGTATGAA GAAGAGATCG CACGCCTGGT CAGAACTGCC
GGCCTGATCG GATTCAGTGT CCGGACGTCC ATCAAAAAGG CACTCTTCTC CCGGCCAGAG
GATGCTACCG GGGATCTCTC GTTCATCGAT GCCCGGTTCT GGCAGGACAC CGAGCCGGCA
TTTCATAAAA CGCTCGATGA ACTCGCCACC CTGCTGAAGG ATGGGGGCGA TAGAACTACA
TTGAAGTTGA ACTGGCTGAA GTCTCTCAGA GATGAAGGGA AGCGGCTCTT CGATGACTAT
TCCCAGGCTG ATCTGATTGA TCAGACCGAT CCCAAGAGGG TTGCCCTGGC CTGGCGGGAT
CTCCAACGGT TTACTTCAAG ATTCAATAAA AAGGTCCGCG AAACGCTCGA CCTTCCTATT
GAGGCAAAAC CGGATGAGGC GGATATCCCT GATGCTGGCG TATGA
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| Protein sequence | MLNLIEQAWI PVIRKDGERS TIAPWELTSD YQENPIVELD APRPDFNGAL VQFLIGIVQT
ELPPTNPVTW KRMFRRPPEP ADLKASFSTH IEAFNLDGDG PRFMQDLTLA KGEALAIDKL
LIERPGEQTV KKNTDHFLKR GGIDHLCMTC AAMALFTLQT NAPSGGRGHR TSLRGGGPLT
TLVTGRTLWE TVWLNVISPQ ELERYGNSAL TSAADIFPWM GETRTSNNNE ITTPQDVNPA
QMFWGMPRRI RLDLDGKPEP GECDLCGKTT ERQVSTFSAK DSGVNYKGGW CHVLSPYSTN
PKGELLAKHA QPGGVTYRNW LGLVQNDSQN NSQPAAVVSL FREQRQLGLN GFQPHLWAFG
YDMDNMKARC WYEGKMPLHH IDEGLLPGYE EEIARLVRTA GLIGFSVRTS IKKALFSRPE
DATGDLSFID ARFWQDTEPA FHKTLDELAT LLKDGGDRTT LKLNWLKSLR DEGKRLFDDY
SQADLIDQTD PKRVALAWRD LQRFTSRFNK KVRETLDLPI EAKPDEADIP DAGV
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