| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpal_1602 |
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| Symbol | |
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| ID | 7272144 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanosphaerula palustris E1-9c |
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| Kingdom | Archaea |
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| Replicon accession | NC_011832 |
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| Strand | - |
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| Start bp | 1649480 |
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| End bp | 1650391 |
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| Gene Length | 912 bp |
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| Protein Length | 303 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 643570215 |
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| Product | CRISPR-associated protein Cas1 |
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| Protein accession | YP_002466637 |
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| Protein GI | 219852205 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1518] Uncharacterized protein predicted to be involved in DNA repair |
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| TIGRFAM ID | [TIGR00287] CRISPR-associated endonuclease Cas1
[TIGR03638] CRISPR-associated endonuclease Cas1, ECOLI subtype |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.19087 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.843574 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCTCCCCC CTCTCAAACC CATTACCATC AAAGAACGAA TGTCGATGCT CTTCCTGGAG
CGAGGAGAAC TGGATGTTCT CGATGGTGCA TTTGTCCTGG TCGATAAAAA CGGTGTCCGC
ACCCAGATCC CGATCGGTTC AGTTGCATGC CTGATGCTCG AACCTGGGAC CAGGGTCTCC
CATGCTGCCG TGGTGCTGGC AGCCAGGGTC GGATGCCTGC TGATCTGGGT TGGTGAGGCC
GGGGTCAGGC TCTATGCGGC AGGACAGCCC GGCGGTGCCA GGTCTGACCG GTTGTTGTAC
CAAGCAAAAC TCGCACTCGA CCCGGAGGCA CGCCTCAAAG TTGTACAGAA GATGTATGAG
ATCCGGTTTC AGGGCCCTGT CCCCTCCCAT TACAGTATTG AACAACTCCG GGGTATGGAG
GGGGCACGGG TCAGGGAGAT GTACGTGCAG ATCGGAAATC AGAACGGGAT TACCTGGAAA
GGGCGGGGAT ATGATCACAC CGAATGGGAG AGCGGTGATC TCTCGAACCG GTGCCTGAGT
TCTGCCACCG CATGTCTATA TGGGATCTGC GAGGCGGCGA TCCTGGCTGC GGGTTACGCG
CCGGCTATTG GGTTTATTCA CTCTGGAAAG CCGCAGTCGT TTGTATACGA TATCGCCGAT
CTTTTCAAAT TTGAGACTGT GGTCCCGGTA GCGTTTAGGG TTGCAGCGAA GAACCCAACT
GATCCTGAAC GTATGGTCAG GCTCGGGTGC AGGGATATGT TCCGGGAGAC ACGAATCTTG
AGGAAGATCA TCCCTGCCAT CGAGACGGTG CTGGCTGCCG GCGGGCTCCC GGTTCCACAG
GCCCCTGCCG ATACATTGAA ACCTGCGATC CCAGTGGAGA AGGGGTTGGG CGATGCTGGT
CATCGTGGTT GA
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| Protein sequence | MLPPLKPITI KERMSMLFLE RGELDVLDGA FVLVDKNGVR TQIPIGSVAC LMLEPGTRVS
HAAVVLAARV GCLLIWVGEA GVRLYAAGQP GGARSDRLLY QAKLALDPEA RLKVVQKMYE
IRFQGPVPSH YSIEQLRGME GARVREMYVQ IGNQNGITWK GRGYDHTEWE SGDLSNRCLS
SATACLYGIC EAAILAAGYA PAIGFIHSGK PQSFVYDIAD LFKFETVVPV AFRVAAKNPT
DPERMVRLGC RDMFRETRIL RKIIPAIETV LAAGGLPVPQ APADTLKPAI PVEKGLGDAG
HRG
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