Gene Mpal_1571 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMpal_1571 
Symbol 
ID7271116 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanosphaerula palustris E1-9c 
KingdomArchaea 
Replicon accessionNC_011832 
Strand
Start bp1620399 
End bp1621133 
Gene Length735 bp 
Protein Length244 aa 
Translation table11 
GC content57% 
IMG OID643570185 
Productpeptidylprolyl isomerase FKBP-type 
Protein accessionYP_002466607 
Protein GI219852175 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG1047] FKBP-type peptidyl-prolyl cis-trans isomerases 2 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCACTGA ACACAGGGGA ATTTATCAGA CTTAACTATA CCGGCACGGT GGACGGGATC 
GTATTTGACA CCACCGTAGA AGAGAAGGCG AAGGAGGCGG GGATCGACAA CCCGTCTGCA
GAGTACGGAC CAATCGTGAT CCAGCTCGGT CGCGGCCATG TGATCGCAGG GCTCGATGAG
GCTCTGATCG GCAAGGAAGC CAGCGATGAA GGAGATGTCG AAGTTCCGCC GGAGAAGGGT
TTCGGCCCTT ACGACAGAAA CCAGGTCGAG GCGATCCCGG TCAAGAAGTT CAAGAACAAA
CCGCAGGTCG GTGCCCGGGT CCAGATCGAG AACCGTGAAG GTGTCGTCCG CGACATCATC
GGCGGCCGTG CCGTCATCGA CTACAACCAC AACCTCGCAG GACAGACCCT GCAGTACCAC
TACACCATCG AAGGGCTCGT CGAGGACCCG ATCGAGAAGA TCAGAGGGTT GATCCAGCTG
TACGCCGGTA AGTCCATGGA TGTCGTCCTC GAGGATGGTG TCCTGACTAT ATCGCTTCCA
CCAGCGATCA CCTACGACCG CCGGTGGCTC CTCTGGAGAG GAACGATTGT CCATGATATC
TTCGAGATCG TCGCTGATAT CAAGGAGATC AAACTCATCG AGTCCGTCAA GCGTCCGGAA
GCAACACCAG AAGAGGCAGT TCCAGAAGAG GCAGCACCTG CCATAGAGCA GGAACCTGCC
CCTGAGCAGG CATAA
 
Protein sequence
MALNTGEFIR LNYTGTVDGI VFDTTVEEKA KEAGIDNPSA EYGPIVIQLG RGHVIAGLDE 
ALIGKEASDE GDVEVPPEKG FGPYDRNQVE AIPVKKFKNK PQVGARVQIE NREGVVRDII
GGRAVIDYNH NLAGQTLQYH YTIEGLVEDP IEKIRGLIQL YAGKSMDVVL EDGVLTISLP
PAITYDRRWL LWRGTIVHDI FEIVADIKEI KLIESVKRPE ATPEEAVPEE AAPAIEQEPA
PEQA