Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mpal_1563 |
Symbol | |
ID | 7271108 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methanosphaerula palustris E1-9c |
Kingdom | Archaea |
Replicon accession | NC_011832 |
Strand | + |
Start bp | 1610736 |
End bp | 1612520 |
Gene Length | 1785 bp |
Protein Length | 594 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 643570177 |
Product | Aldehyde ferredoxin oxidoreductase |
Protein accession | YP_002466599 |
Protein GI | 219852167 |
COG category | [C] Energy production and conversion |
COG ID | [COG2414] Aldehyde:ferredoxin oxidoreductase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.303039 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGATGGAT ATGCCGGCAC CATACTGCAT GTCGACCTGA CCAGAGGTAC CCTTGCATCA CGGCCATACC CGGAGGATCT GCAGAGGCAG TACTTCGGGA GCCGGGGACT TGGAGTCAGA CTGGTGAGCG ACCTGGTCAA CCCGACCACG GCCCCGCTCG GGGAAGGAAA CGTGATCGTC TTTGCCACGG GTCCGCTGAC CGGGTCGGGG GTTCCACTCG GGGCCAGGTA CGGGGTGATC ACCAAATCCC CCCTGAACGG CACACTCTGC TCCTCTGACA GCGGCGGATT CTTCGGGACC GAACTGAAAC GTGCAGGGTT CGACGCAGTC GTTATATCAG GCCGGTCCCC GACCCCTGTC TATCTGTGGC TGCATGATAC GGTTGCCGAA CTGAAGGAAG CCTCGGCCTA CTGGGGAAAG ACCGTCAACG AGACCACCGA CGGGCTTCTT ACGGAGCTCG GAGACACCCA TGCCAGGGTC TCCTGTATTG GTCCGGCCGG AGAACGATTG AGTCTGATCG CCTGTGTGAT GAACGACAGG TATCGGGCCG CCGGCAGGGG CGGACCCGGG GCGGTGATGG GGTCCAAGTA CCTCAAAGCC ATCGTGGCCA GGGGGTCCGG GAAGATCACC ACAGCCCGTC CAGAGGAGTT GAAGGGGGTG ACCGCCGATA TCAGGGCCAG GATCCATGCC GGCGGCGTGA CCGGGAAGGG GCTGCCCGAA TACGGCACCT CGGTGCTGGT GAACATCATC AACAACAGTC ACATGCTCCC GGTCAGAAAT CACCAAGCGG CATACTTCCC GACTGCAGAG AACCTCTCCG GGGAGCGTGT CAGGGAGACG ATCTTCGTCC GGAAGAAACC CTGTTATGCC TGCATCATCG GCTGCGGGCG GGGGACGGTC GTGGACGGTG TCGAAGCAGA GGGGCCGGAG TACGAACAGA CATGGTCGCT CGGTGTGGAC TGTGGTATCG ACGACCTGAC CTGGGTGGCC AGGGCCAACA ACCTCTGCAA CAACCTCGGG ATCGACGCCC TCTCTGCCGG GGTCACGATC GCCTGCGCGA TGGAACTCTC CAAAAAGGGG ATCATCCCGG AATCGATCCG GTTCGGGGAC AGGGAGCAGA TGTACGACCT GGTCAGGCAG ATGGGATACC GCGAAGGGAT CGGCGACCAG CTGGCCGATG GGTCGTACCG TTTTGCCGAG CGGTACGGTC ATCCCGAACT CTCGATGAGT GCCAAGAAAC TCGAACTGGC CGCCTATGAC CCCCGGGCCG TCCAGGGGCA GGGCCTCTCC TATGCGACCG GTGTCCGGGG CGGGGACCAT ATCAATGGAT ATATGATCTC CCCCGAGATA CTCGGGATCC CCAAGCGGCT CGATCCCTTT GAGACAGAGG GGAAGGCCGC CTGGACCAGG ACGTTCCAGG ACATGACCGC TGCGATCGAT GCAAGCGGGA TCTGCCTCTT CACCTCGCTG GCGCCGCTCG GGGCCGCGGA TTATGCCGCG ATGCTCTCCG GGGTGACCGG TATGACGGTC ACCGCCGACC AGTTCATGGA GGTCGGCGAG CGGATCTGGA ATCTGCAGAA ACTCTTCAAC ATCAGGGCCG GCCTGACGAA GGCTGACGAT ACGCTCCCAC CGCGGCTGCT GCATGAGCCC CTGCAGGAAG GGGCACCGAA GGGGAAGGTC TGGGAACGGG AGCCGATGCT CGATCAGTAT TACGCAGTCC GGGGGTGGGA CGCCGAAGGG CGACCGACCC CACAGACTCT ACATCGGCTC GGGCTCTCAG GATGA
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Protein sequence | MDGYAGTILH VDLTRGTLAS RPYPEDLQRQ YFGSRGLGVR LVSDLVNPTT APLGEGNVIV FATGPLTGSG VPLGARYGVI TKSPLNGTLC SSDSGGFFGT ELKRAGFDAV VISGRSPTPV YLWLHDTVAE LKEASAYWGK TVNETTDGLL TELGDTHARV SCIGPAGERL SLIACVMNDR YRAAGRGGPG AVMGSKYLKA IVARGSGKIT TARPEELKGV TADIRARIHA GGVTGKGLPE YGTSVLVNII NNSHMLPVRN HQAAYFPTAE NLSGERVRET IFVRKKPCYA CIIGCGRGTV VDGVEAEGPE YEQTWSLGVD CGIDDLTWVA RANNLCNNLG IDALSAGVTI ACAMELSKKG IIPESIRFGD REQMYDLVRQ MGYREGIGDQ LADGSYRFAE RYGHPELSMS AKKLELAAYD PRAVQGQGLS YATGVRGGDH INGYMISPEI LGIPKRLDPF ETEGKAAWTR TFQDMTAAID ASGICLFTSL APLGAADYAA MLSGVTGMTV TADQFMEVGE RIWNLQKLFN IRAGLTKADD TLPPRLLHEP LQEGAPKGKV WEREPMLDQY YAVRGWDAEG RPTPQTLHRL GLSG
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