Gene Mpal_1563 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMpal_1563 
Symbol 
ID7271108 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanosphaerula palustris E1-9c 
KingdomArchaea 
Replicon accessionNC_011832 
Strand
Start bp1610736 
End bp1612520 
Gene Length1785 bp 
Protein Length594 aa 
Translation table11 
GC content63% 
IMG OID643570177 
ProductAldehyde ferredoxin oxidoreductase 
Protein accessionYP_002466599 
Protein GI219852167 
COG category[C] Energy production and conversion 
COG ID[COG2414] Aldehyde:ferredoxin oxidoreductase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.303039 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATGGAT ATGCCGGCAC CATACTGCAT GTCGACCTGA CCAGAGGTAC CCTTGCATCA 
CGGCCATACC CGGAGGATCT GCAGAGGCAG TACTTCGGGA GCCGGGGACT TGGAGTCAGA
CTGGTGAGCG ACCTGGTCAA CCCGACCACG GCCCCGCTCG GGGAAGGAAA CGTGATCGTC
TTTGCCACGG GTCCGCTGAC CGGGTCGGGG GTTCCACTCG GGGCCAGGTA CGGGGTGATC
ACCAAATCCC CCCTGAACGG CACACTCTGC TCCTCTGACA GCGGCGGATT CTTCGGGACC
GAACTGAAAC GTGCAGGGTT CGACGCAGTC GTTATATCAG GCCGGTCCCC GACCCCTGTC
TATCTGTGGC TGCATGATAC GGTTGCCGAA CTGAAGGAAG CCTCGGCCTA CTGGGGAAAG
ACCGTCAACG AGACCACCGA CGGGCTTCTT ACGGAGCTCG GAGACACCCA TGCCAGGGTC
TCCTGTATTG GTCCGGCCGG AGAACGATTG AGTCTGATCG CCTGTGTGAT GAACGACAGG
TATCGGGCCG CCGGCAGGGG CGGACCCGGG GCGGTGATGG GGTCCAAGTA CCTCAAAGCC
ATCGTGGCCA GGGGGTCCGG GAAGATCACC ACAGCCCGTC CAGAGGAGTT GAAGGGGGTG
ACCGCCGATA TCAGGGCCAG GATCCATGCC GGCGGCGTGA CCGGGAAGGG GCTGCCCGAA
TACGGCACCT CGGTGCTGGT GAACATCATC AACAACAGTC ACATGCTCCC GGTCAGAAAT
CACCAAGCGG CATACTTCCC GACTGCAGAG AACCTCTCCG GGGAGCGTGT CAGGGAGACG
ATCTTCGTCC GGAAGAAACC CTGTTATGCC TGCATCATCG GCTGCGGGCG GGGGACGGTC
GTGGACGGTG TCGAAGCAGA GGGGCCGGAG TACGAACAGA CATGGTCGCT CGGTGTGGAC
TGTGGTATCG ACGACCTGAC CTGGGTGGCC AGGGCCAACA ACCTCTGCAA CAACCTCGGG
ATCGACGCCC TCTCTGCCGG GGTCACGATC GCCTGCGCGA TGGAACTCTC CAAAAAGGGG
ATCATCCCGG AATCGATCCG GTTCGGGGAC AGGGAGCAGA TGTACGACCT GGTCAGGCAG
ATGGGATACC GCGAAGGGAT CGGCGACCAG CTGGCCGATG GGTCGTACCG TTTTGCCGAG
CGGTACGGTC ATCCCGAACT CTCGATGAGT GCCAAGAAAC TCGAACTGGC CGCCTATGAC
CCCCGGGCCG TCCAGGGGCA GGGCCTCTCC TATGCGACCG GTGTCCGGGG CGGGGACCAT
ATCAATGGAT ATATGATCTC CCCCGAGATA CTCGGGATCC CCAAGCGGCT CGATCCCTTT
GAGACAGAGG GGAAGGCCGC CTGGACCAGG ACGTTCCAGG ACATGACCGC TGCGATCGAT
GCAAGCGGGA TCTGCCTCTT CACCTCGCTG GCGCCGCTCG GGGCCGCGGA TTATGCCGCG
ATGCTCTCCG GGGTGACCGG TATGACGGTC ACCGCCGACC AGTTCATGGA GGTCGGCGAG
CGGATCTGGA ATCTGCAGAA ACTCTTCAAC ATCAGGGCCG GCCTGACGAA GGCTGACGAT
ACGCTCCCAC CGCGGCTGCT GCATGAGCCC CTGCAGGAAG GGGCACCGAA GGGGAAGGTC
TGGGAACGGG AGCCGATGCT CGATCAGTAT TACGCAGTCC GGGGGTGGGA CGCCGAAGGG
CGACCGACCC CACAGACTCT ACATCGGCTC GGGCTCTCAG GATGA
 
Protein sequence
MDGYAGTILH VDLTRGTLAS RPYPEDLQRQ YFGSRGLGVR LVSDLVNPTT APLGEGNVIV 
FATGPLTGSG VPLGARYGVI TKSPLNGTLC SSDSGGFFGT ELKRAGFDAV VISGRSPTPV
YLWLHDTVAE LKEASAYWGK TVNETTDGLL TELGDTHARV SCIGPAGERL SLIACVMNDR
YRAAGRGGPG AVMGSKYLKA IVARGSGKIT TARPEELKGV TADIRARIHA GGVTGKGLPE
YGTSVLVNII NNSHMLPVRN HQAAYFPTAE NLSGERVRET IFVRKKPCYA CIIGCGRGTV
VDGVEAEGPE YEQTWSLGVD CGIDDLTWVA RANNLCNNLG IDALSAGVTI ACAMELSKKG
IIPESIRFGD REQMYDLVRQ MGYREGIGDQ LADGSYRFAE RYGHPELSMS AKKLELAAYD
PRAVQGQGLS YATGVRGGDH INGYMISPEI LGIPKRLDPF ETEGKAAWTR TFQDMTAAID
ASGICLFTSL APLGAADYAA MLSGVTGMTV TADQFMEVGE RIWNLQKLFN IRAGLTKADD
TLPPRLLHEP LQEGAPKGKV WEREPMLDQY YAVRGWDAEG RPTPQTLHRL GLSG