| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpal_1369 |
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| Symbol | |
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| ID | 7269974 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanosphaerula palustris E1-9c |
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| Kingdom | Archaea |
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| Replicon accession | NC_011832 |
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| Strand | + |
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| Start bp | 1408047 |
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| End bp | 1410080 |
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| Gene Length | 2034 bp |
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| Protein Length | 677 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 643570001 |
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| Product | DNA sulfur modification protein DndD |
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| Protein accession | YP_002466423 |
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| Protein GI | 219851991 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0419] ATPase involved in DNA repair |
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| TIGRFAM ID | [TIGR03185] DNA sulfur modification protein DndD |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.24042 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.947657 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTCCTAA AATCACTTAC TCTCGAAAAT ATCAGGATCT TTAAAGGAGT GAACACGCTT
GATTTCACTC CGGTCCACAG TTCAAAAGAG CAAAAGTCGA TCATTCTCAT AGGTGGTAAA
AATGGTGCAG GAAAGACGAC CATGTTTGAA TCGATTCTGC TCTGCCTCTA TGGTCAGAAC
TCTCCGGATG GCCGTATGGG GAAGAAGAAA TATGAAAAAT ATATTGCACA GATGACGGCA
CGGAACAAAA AAACTGAAGA TCCCTATAAT CCTGCCATCG ATGTGGTTTT TGAGTTTTCA
CATTCTGGAA CAACTCACTC TTATTCTGTC CGGAGAGAGT GGATCACTCA TCCTCAATTT
TCTGAGACAC TCACCGTCAA ACGGGATGGA GAGATACTTT CAGATATGGA GGTAGATCAA
TGGCAGGACC TGTTGAACGA ACTGATTCCT CCGAGATTCG CTCGTCTCTT TTTGTTTGAC
GGGGAAAAAA TTCAGAATCT TGTTGAAGAC AATACGGATA ATCTGTACCT TCGGGATTCA
TTTAAATCCC TGCTTGGTCT CGATATTGTC GAGCGCTTAA AAGCAGATCT TGGGATCTAT
CTCACCCGTC ATCTTAAGGT CAAAGAGGTC CACCATATTA CGCAAAAACT TGACGAACTC
GAAACATCAG GTAAAGATAT TGATACAAAA AAAGATCATT ACCTCCAGGA CCGAGCACAG
GTGCAGAGCC GTTATGATCA GATCTCTTCC GAGATTGAGC GGCAGGAACA GATCGTTGCC
AGCGAGGGCG GAAGCTTCGC CCGGAAACGT GAAGAACTCA AAAACCAGAA GAATCAACTG
GATCATCAGA TTACCACGAT CGAAGGGGAT ATACGAGAAC TCTGTGCTGG TCTGTTCCCC
TTTGCTATCA TCCCTAAATA TTGTAATCTG CTCAAACAGC ATCTGATTGA GGAAGACACC
ATTCAGGCAC GGAAACGCTC GGAGGATCTT ATTCGGTCCA ATGTCGACGA ACTCAACAGG
ATCCTCAAAT CCCCAGCCTT TTGGTCTGAT CTATCCATAT CATCCTCACA AAAAGAGAGA
GTTCGGACAA AACTCTCCAC CCTTCTCGAT GAAAAATTCC TGATGGGAAA CAAAATCGAC
AGATCAATCC TGATTCATCA TCTCTCCCAG TATGAATATA ACCGGCTATT GCAATGGATT
GATGATTCGA TCACCAACGT TCCCAAAAAA ATGAATGACC TCTCCCTGCA ACTTGAGAAC
CTGACCTCAA AGCGCCAGAA AGTTGCTGAG ATGATCAATA AAGCTCCTTC TGATGATGTT
ATTGCTCCGT TGATTCAGAA ACTCAACGAA CTGAGCAAAC ATCTCGGAGA GTTATCAGAG
AAGCTGCGGG TGGCTGATGA GAAGATCCAT GAGTTCGATT CCCAGTTAAA AGAAATTGAG
AGGCAAAGAT TGAAACTGGA TGAAGAACTC CAGGGAGTCA AGTGCGGGTC CAAGAAGATG
CAACTCGCTC AGCAGGTTAC CCTCATCCTC AATGAATACA TGAAAGAACT CCAGCGCCAG
AAGGTCAGCC AACTCAGCGA TAATATTCTC TCATGTTTCA CCCGGTTGAT CAGGAAAGAC
GATTATGTCA AAGATATCCT GATTGATGAA AATTATGCAA TTACCCTCTA TGAACCGGAT
GGGCATGCAA TCCCTAAAGA ACTTCTCTCT GCCGGCGAAA AAGAGATCTT TGCGGTTTCT
CTTCTCTGGG GGCTCACATT GACGTCAGGA CGACAGCTTC CCTTTATCAT CGATACGCCA
TTAGGACGAT TGGATAGCGA ACATCGAGGA AACCTGGTGA TGGATTTCTT CCAGCATGCC
GGGGATCAGA TGATTATCTT CTCTACCGAT ACCGAGATTG ACAAGGATTA TTTCCGCACT
CTGCAGCCCT ACATTGCCCG GGCATATCAT CTGAATTACT CGAAAGAGGA GCGCCAAACC
ACTATCTCTC CGGGATATTT CTGGCAGAGC GAGCCTGTGG AGTTGGAATC ATGA
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| Protein sequence | MLLKSLTLEN IRIFKGVNTL DFTPVHSSKE QKSIILIGGK NGAGKTTMFE SILLCLYGQN
SPDGRMGKKK YEKYIAQMTA RNKKTEDPYN PAIDVVFEFS HSGTTHSYSV RREWITHPQF
SETLTVKRDG EILSDMEVDQ WQDLLNELIP PRFARLFLFD GEKIQNLVED NTDNLYLRDS
FKSLLGLDIV ERLKADLGIY LTRHLKVKEV HHITQKLDEL ETSGKDIDTK KDHYLQDRAQ
VQSRYDQISS EIERQEQIVA SEGGSFARKR EELKNQKNQL DHQITTIEGD IRELCAGLFP
FAIIPKYCNL LKQHLIEEDT IQARKRSEDL IRSNVDELNR ILKSPAFWSD LSISSSQKER
VRTKLSTLLD EKFLMGNKID RSILIHHLSQ YEYNRLLQWI DDSITNVPKK MNDLSLQLEN
LTSKRQKVAE MINKAPSDDV IAPLIQKLNE LSKHLGELSE KLRVADEKIH EFDSQLKEIE
RQRLKLDEEL QGVKCGSKKM QLAQQVTLIL NEYMKELQRQ KVSQLSDNIL SCFTRLIRKD
DYVKDILIDE NYAITLYEPD GHAIPKELLS AGEKEIFAVS LLWGLTLTSG RQLPFIIDTP
LGRLDSEHRG NLVMDFFQHA GDQMIIFSTD TEIDKDYFRT LQPYIARAYH LNYSKEERQT
TISPGYFWQS EPVELES
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