Gene Mpal_1314 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMpal_1314 
Symbol 
ID7271175 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanosphaerula palustris E1-9c 
KingdomArchaea 
Replicon accessionNC_011832 
Strand
Start bp1350239 
End bp1350934 
Gene Length696 bp 
Protein Length231 aa 
Translation table11 
GC content59% 
IMG OID643569948 
ProductUBA/THIF-type NAD/FAD binding protein 
Protein accessionYP_002466370 
Protein GI219851938 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0476] Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 2 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.530207 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTGATCT TCGATGAAGA CGGGCAGGAG CGACTGAAGC AGGCGACGAT CGTAATCGCA 
GGCGCTGGAG GTCTCGGTTC ACCGGTGGCA GTGTACTGTG CGGCTGCAGG TATTGGCAGG
ATCGTGTTGA TCGATAAGGA TACTGTCGAC CTCTCCAATC TGAACCGGCA GATTCTCCAT
TCGACTCCGG ATATCGGGAG GAGGAAGGTC ATCTCTGCAG AGGAGAAACT GCAGGCCCTG
AATCCGGATA TTGAGGTTGT GGCGATCCAC GAGACGATCG ATGCCGGGAA CATCGGGGAT
CTGGTCGGGG ATGCCGATGG GATCGTCGAC GCGATGGATA ACTACCCGAT CCGGTTCCTG
CTGAATCAGA CCGCCCTGAG CAAAGGGATC CCCCTTTTTC ATGGTGCGAT CAGAGGATTC
CATGGCCAGG CAACCACGAT CGTTCCCGGG GAGACCCCCT GCCTCTCCTG TATCTTTCCC
CATGCCCCTC CAAAGGAGGT CTTTCCGGTG GTCGGCGTGA CTCCCGGGAT CATCGGAATG
ATCCAGGCAG GCGAGGTGAT CAAGTACCTG ACCGGGACCG GAACTCTGCT CGCCGGAAGG
TTGCTGCTCT GGGACGGTCT CAATAGCCGG ACCGAGGAGA TCACCGTCGC GGCAAACCCA
CACTGCGAGG TCTGCGGTTC ACCGCAGAAG GAGTAA
 
Protein sequence
MLIFDEDGQE RLKQATIVIA GAGGLGSPVA VYCAAAGIGR IVLIDKDTVD LSNLNRQILH 
STPDIGRRKV ISAEEKLQAL NPDIEVVAIH ETIDAGNIGD LVGDADGIVD AMDNYPIRFL
LNQTALSKGI PLFHGAIRGF HGQATTIVPG ETPCLSCIFP HAPPKEVFPV VGVTPGIIGM
IQAGEVIKYL TGTGTLLAGR LLLWDGLNSR TEEITVAANP HCEVCGSPQK E