Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mpal_1257 |
Symbol | |
ID | 7271535 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methanosphaerula palustris E1-9c |
Kingdom | Archaea |
Replicon accession | NC_011832 |
Strand | + |
Start bp | 1284911 |
End bp | 1285903 |
Gene Length | 993 bp |
Protein Length | 330 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 643569891 |
Product | ABC transporter related |
Protein accession | YP_002466315 |
Protein GI | 219851883 |
COG category | [V] Defense mechanisms |
COG ID | [COG1131] ABC-type multidrug transport system, ATPase component |
TIGRFAM ID | [TIGR01188] daunorubicin resistance ABC transporter ATP-binding subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.298467 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGAGGGAGA GTATCATCCG GATCGAACAT CTCTCCAAGG TCTTCCCATC CAAACAGGGA CCGGTGGCCG CTGTCGATGA TATCTCTTTC GAGGTAAAAC GTGGCGAGAT CTTCGGCCTG CTCGGCCCGA ATGGGGCCGG CAAGAGCACG CTCATCAGGA TCCTCACCAC CCTGATCTCC CCGAGTTCCG GGGCCGCGTT CATCGATTCC TATGAGGTAT CGGCTTCTCC CGAGCAGATC CGCGGGTTGA TTGGTGTCTG CCCGCAGAAC AGTACCCTGG ATCAGGAACT GACCGCCTAC GATAACCTTG AGTTTTACGG CAGGTTGCAG AACATGGAGG ATCGGGTGCT CAAGCCCCGG ATCTGGCAAC TCCTGGAGAT GACCGGGCTT CAAGACAGGG CCCGTTCTCC AGTCAGTACC TTCTCCGGCG GAATGAAACG GAAACTTGAG ATTGTCCGGG CGTTCATCCA TAAGCCGGAT ATCCTCTTCC TGGATGAACC GACGATCGGA CTCGATCCCG AGTCCCGGCG CGAGGTGTGG CAGCAGATTG AACAGTTGAA CGTTGAAGAG ACGACGATCA TCCTGACCAC CCATTATATG GATGAGGCCG AGAGGCTCTG CAACCGGATA GCATTCGTCG ACCAGGGTCG ACTGATCGCC CTGGACACGA TGGAGAACCT GCGACGATCG TTTCCGGTTG GCGACCTGAT CGAGATTGGG GTTGTGAAGA TAACCGGGGA TCTCCTCGCC CGGATCAGAG AGATACCCCA GGTTGGTTCT GTCGATGTCA GGGGACTGAA CCTGCTGATC GTGACAAGAG ATGCGAGTAT CGTCCTCCCC GATCTCCTGC GGGTCCTCGA ACAGTTCTCA AACCCAATGA CCTCGATTGC AATCCGGTCG CCGTCCCTCG AGGATATCTT CATCTACCTG ACCGGGCAGG TTCCAGAGTC CGATGCGATC GCGACCGGTG AAGTCGGGAG GCAGGATTCA TGA
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Protein sequence | MRESIIRIEH LSKVFPSKQG PVAAVDDISF EVKRGEIFGL LGPNGAGKST LIRILTTLIS PSSGAAFIDS YEVSASPEQI RGLIGVCPQN STLDQELTAY DNLEFYGRLQ NMEDRVLKPR IWQLLEMTGL QDRARSPVST FSGGMKRKLE IVRAFIHKPD ILFLDEPTIG LDPESRREVW QQIEQLNVEE TTIILTTHYM DEAERLCNRI AFVDQGRLIA LDTMENLRRS FPVGDLIEIG VVKITGDLLA RIREIPQVGS VDVRGLNLLI VTRDASIVLP DLLRVLEQFS NPMTSIAIRS PSLEDIFIYL TGQVPESDAI ATGEVGRQDS
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