Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mpal_1232 |
Symbol | |
ID | 7271510 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methanosphaerula palustris E1-9c |
Kingdom | Archaea |
Replicon accession | NC_011832 |
Strand | + |
Start bp | 1264411 |
End bp | 1264977 |
Gene Length | 567 bp |
Protein Length | 188 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 643569869 |
Product | protein of unknown function DUF204 |
Protein accession | YP_002466293 |
Protein GI | 219851861 |
COG category | [S] Function unknown |
COG ID | [COG1971] Predicted membrane protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 7 |
Fosmid unclonability p-value | 0.0811336 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGATGCAG TGATTGAATC AGTGCTGATC GGTCTCGGCC TTGCGATGGA CTGTTTTGCT GTCACCCTTG CGACGGGGAG TTCAGCCGGT ATCGATCGAT TCAAGACAGC GATCATCCTC GCGGCGACAT TCGGTCTCTT TCAGGGAGGG ATGACGATTG GTGGCTGGTT GCTTGGGATA TCCTTCGCTG GTTTCGTCAC CAGATATGCA CCCTGGATCG CATTTTTGCT GCTGACCGGG ATCGGTGTGA AGATGTGTAT CGAAGGGGTC AGGGGCGGGG ATACCCGGGA ACGGCCATCG TCACTCCGTG CCGGTGTGGT CATTGGACTT GCCATCGCCA CCAGTATCGA CGCGCTGGCA GTCGGGATCA GCTATGCACT GCTCGGAGTC GAACCTGTGA TCCCGTCCCT GATCATCGGT GCGGTTGCAT TCTGTATTTC GTTTGCCGGG GTCTATGCTG GTATCAGATT GGCACCGGTT CTTGGCACCC GTGTGGACTT CTTTGGTGGG GCTGTGTTGA TGTTGATCGG GGTTAAGGTG CTGGCAGATC ACCTGGCCCT GATCTGA
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Protein sequence | MDAVIESVLI GLGLAMDCFA VTLATGSSAG IDRFKTAIIL AATFGLFQGG MTIGGWLLGI SFAGFVTRYA PWIAFLLLTG IGVKMCIEGV RGGDTRERPS SLRAGVVIGL AIATSIDALA VGISYALLGV EPVIPSLIIG AVAFCISFAG VYAGIRLAPV LGTRVDFFGG AVLMLIGVKV LADHLALI
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