Gene Mpal_1232 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMpal_1232 
Symbol 
ID7271510 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanosphaerula palustris E1-9c 
KingdomArchaea 
Replicon accessionNC_011832 
Strand
Start bp1264411 
End bp1264977 
Gene Length567 bp 
Protein Length188 aa 
Translation table11 
GC content56% 
IMG OID643569869 
Productprotein of unknown function DUF204 
Protein accessionYP_002466293 
Protein GI219851861 
COG category[S] Function unknown 
COG ID[COG1971] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0811336 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATGCAG TGATTGAATC AGTGCTGATC GGTCTCGGCC TTGCGATGGA CTGTTTTGCT 
GTCACCCTTG CGACGGGGAG TTCAGCCGGT ATCGATCGAT TCAAGACAGC GATCATCCTC
GCGGCGACAT TCGGTCTCTT TCAGGGAGGG ATGACGATTG GTGGCTGGTT GCTTGGGATA
TCCTTCGCTG GTTTCGTCAC CAGATATGCA CCCTGGATCG CATTTTTGCT GCTGACCGGG
ATCGGTGTGA AGATGTGTAT CGAAGGGGTC AGGGGCGGGG ATACCCGGGA ACGGCCATCG
TCACTCCGTG CCGGTGTGGT CATTGGACTT GCCATCGCCA CCAGTATCGA CGCGCTGGCA
GTCGGGATCA GCTATGCACT GCTCGGAGTC GAACCTGTGA TCCCGTCCCT GATCATCGGT
GCGGTTGCAT TCTGTATTTC GTTTGCCGGG GTCTATGCTG GTATCAGATT GGCACCGGTT
CTTGGCACCC GTGTGGACTT CTTTGGTGGG GCTGTGTTGA TGTTGATCGG GGTTAAGGTG
CTGGCAGATC ACCTGGCCCT GATCTGA
 
Protein sequence
MDAVIESVLI GLGLAMDCFA VTLATGSSAG IDRFKTAIIL AATFGLFQGG MTIGGWLLGI 
SFAGFVTRYA PWIAFLLLTG IGVKMCIEGV RGGDTRERPS SLRAGVVIGL AIATSIDALA
VGISYALLGV EPVIPSLIIG AVAFCISFAG VYAGIRLAPV LGTRVDFFGG AVLMLIGVKV
LADHLALI