| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpal_1215 |
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| Symbol | |
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| ID | 7271493 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanosphaerula palustris E1-9c |
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| Kingdom | Archaea |
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| Replicon accession | NC_011832 |
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| Strand | + |
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| Start bp | 1249184 |
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| End bp | 1250365 |
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| Gene Length | 1182 bp |
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| Protein Length | 393 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 643569852 |
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| Product | aminotransferase class V |
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| Protein accession | YP_002466276 |
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| Protein GI | 219851844 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0520] Selenocysteine lyase |
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| TIGRFAM ID | [TIGR01979] cysteine desulfurases, SufS subfamily |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.334038 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAACTCG AACTGGCACG GGAGGACTTC CCGCTCTTTG CTGATGTCAC CTACATGGAC
AGCGCTTCGA TCAGCCTGAC GCCGGTCCAG GTGGTGGAGG CGGTCACGGA CTACGACCTT
CACTACCGGG CCAATGTTGG TCGGGGTGTT CATCGGCTCG CACAGATCGC TTCGCTCAAG
TACAACGAAG CGCACCGGAA GGTCGCCGGT TTCATCGATG GGGGGCAGGG GATCACGGCG
TTCGTTCAGA ACACCACGGC AGCGGTGAAC ATGGTCGCTG CCGGTTTCCC CTGGAAGCGA
GGCGATCATG TGGTCACCAC TCTTCTCGAA CACCACTCCA ACCTGCTCCC CTGGATTCGG
CTCCGTGAGC AGGGAGTTTT GGTGACGGTG GTTCCCCCCG GTCCGGATGG AACGATCAGT
CCGGCCTCGA TCGAGGCCGC GATGACCCCG GCAACCAGGC TGGTCGCCGT GACCCACGCC
TCCAACGCCC TCGGCACAAT CGTGCCGATA GAGCAGATCG CAGCGATCTG CCATGCCCAT
GGAGCACTGC TGCTGGTGGA CGGGGCCCAG ACTGTTCCTC ATCTCCCGGT CAGTGTGCAG
GCACTCGACT GTGACATCCT CTGCTTCTCC GGGCACAAGA TGCTCGGACC GACCGGAACT
GGGGTGCTCT GGATGAAGGA TATCTACATC CGGCCGTCGG TGCTCGGCGG CGGGATGGTC
GAGACTGCAA CCACGAATGG GTTCACCCCG GTGCAGGGGT ACCGGCAGTT TGAGGCGGGC
ACTCCGAACA TCTCTGGCGC GATCGGCCTC TCTACGGCAG TCAGTTACCT TGAAGAGATC
GGGATGGCGG CTGTTCGAGT CCATGAGCAG ACACTGACAC GGCGGCTGGT CGACGGCCTC
CGGGGGCTTG GGGGGGTGAC GGTCTATGGG CCGGAACGGG CGGAGGACCG GATCGGCGTG
GTCTCGTTCA CGGTTGACGG TGTCCACCCC CACGACGTGG CGCATATCCT CGATGAGGCA
TCCGGCGTGC TGGTCAGATC TGGCCATCAC TGCTGCATGC CCCTGATGCA GGCTCTCGAC
GCCCCGGATG GTACGGTTCG GGCGAGTCTG TACCTGTACA ACAGCATTGA GGATGTCGAC
CTGCTGATAG CGACCGTCGA GGAACTGGAA CGGAGACAGT GA
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| Protein sequence | MKLELAREDF PLFADVTYMD SASISLTPVQ VVEAVTDYDL HYRANVGRGV HRLAQIASLK
YNEAHRKVAG FIDGGQGITA FVQNTTAAVN MVAAGFPWKR GDHVVTTLLE HHSNLLPWIR
LREQGVLVTV VPPGPDGTIS PASIEAAMTP ATRLVAVTHA SNALGTIVPI EQIAAICHAH
GALLLVDGAQ TVPHLPVSVQ ALDCDILCFS GHKMLGPTGT GVLWMKDIYI RPSVLGGGMV
ETATTNGFTP VQGYRQFEAG TPNISGAIGL STAVSYLEEI GMAAVRVHEQ TLTRRLVDGL
RGLGGVTVYG PERAEDRIGV VSFTVDGVHP HDVAHILDEA SGVLVRSGHH CCMPLMQALD
APDGTVRASL YLYNSIEDVD LLIATVEELE RRQ
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