Gene Mpal_1141 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMpal_1141 
Symbol 
ID7270405 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanosphaerula palustris E1-9c 
KingdomArchaea 
Replicon accessionNC_011832 
Strand
Start bp1171213 
End bp1172013 
Gene Length801 bp 
Protein Length266 aa 
Translation table11 
GC content49% 
IMG OID643569774 
ProductUBA/THIF-type NAD/FAD binding protein 
Protein accessionYP_002466207 
Protein GI219851775 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0476] Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 2 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.158288 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAGATG AACAGATAGA ACGATACAGC AGAAATATAA TTTTAAAAGA GGTTGGAGGA 
AAAGGTCAGG AACGTCTTCT TCAGTCAAAG GTTCTAATTA TCGGTGCCGG TGGATTGGGT
TCTCCAGCCG CTCTCTATCT TGCAGCAGCC GGAGTGGGAA CGATTGGTAT TGTCGATGGC
GACCGGGTCG ACCTGAGCAA CCTCCAGCGG CAGGTCATAC ACTTTACTGC GGATGTAGGT
ACCTACAAGG CAGATTCTGC CCGAGATAAG ATTACTCAAC TCAATCCGGA CGTAACGGTT
CAGATCCATA AGGAGATGGT TTCCTCATCG AACATACGGG AGATCATTAC CGACTATGAT
TTTATCATTG ATGGTACAGA CAATTTCCCA GCAAAGTTCC TGATCAACGA TGCCTGCATC
CTTCTGGGGA AACCATTTTC CCATGCTGGA ATATTGCGGT TCAACGGCCA GACGACAACG
GTGATCCCTG ATAAGAGTGC TTGCTACCGC TGCATCTTCA ACACCCCACC GCCAGTGGGG
ACGGTTCCCA GTTGCAGCGA GTCCGGGGTT ATCGGGAGTA TGGCCGGAGT CATCGGAACC
CTCCAGGCGA TGGAGGCGAT CAAATACCTC CTCGGGATAG GAGACCTCCT GACAAACCGA
CTTCTTGTAT TCGAAGCGCT TCCGATGAAT TTCCGGGAGA TCAAGATTAA AAAGAATCCA
AAATGCCCGG TGTGTGGAGA ACATCCGACC ATCACCTCAC TCATCGATTA TGAACAAAAG
GTTTGTGAGT TGCGGAAATG A
 
Protein sequence
MKDEQIERYS RNIILKEVGG KGQERLLQSK VLIIGAGGLG SPAALYLAAA GVGTIGIVDG 
DRVDLSNLQR QVIHFTADVG TYKADSARDK ITQLNPDVTV QIHKEMVSSS NIREIITDYD
FIIDGTDNFP AKFLINDACI LLGKPFSHAG ILRFNGQTTT VIPDKSACYR CIFNTPPPVG
TVPSCSESGV IGSMAGVIGT LQAMEAIKYL LGIGDLLTNR LLVFEALPMN FREIKIKKNP
KCPVCGEHPT ITSLIDYEQK VCELRK