| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpal_1139 |
|---|
| Symbol | |
|---|
| ID | 7270403 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanosphaerula palustris E1-9c |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_011832 |
|---|
| Strand | - |
|---|
| Start bp | 1169950 |
|---|
| End bp | 1170816 |
|---|
| Gene Length | 867 bp |
|---|
| Protein Length | 288 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 52% |
|---|
| IMG OID | 643569772 |
|---|
| Product | nitrite and sulphite reductase 4Fe-4S region |
|---|
| Protein accession | YP_002466205 |
|---|
| Protein GI | 219851773 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG2221] Dissimilatory sulfite reductase (desulfoviridin), alpha and beta subunits |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 0.079984 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 12 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCAATG AGATTATTGA TCTGGCAGCT CTGAAAAAGA CAGGCATGAT CCAGCAGAAA
CAGAAGGAAT TTTTTGCCCT GCGACTTCAC TCCGTAGGTG GTGATTTCAC CACGCAACAG
ATACGAGGTA TTGCAGAAAT TGCAGATACC TTCGGCAAGG GACAGATCCA CCTGTCCACC
AGACAGGGAA TTGAGATACA CTTTGTACAT GGTGCCGATC TCGAAAAAGC GAAGAGCGAA
CTCGAAGCAG TTGGCGTGAC AATGGGAGCA TGCGGCCCCC GTATCAGGGT TATCACCGCC
TGTCCCGGCA CTCTCACATG CCGATGGGGG ATTATTGATA CGAAGGAGAT CTCTGGCTAC
CTGGATACAA CCTATTTCCG GGAGGAGACC CCGCATAAGT TCAAGATGGC AGTAACGGGT
TGTCCCCACA ACTGTGCAAA GGCGACAGAG AATGATATCG GAGTGATGGG AGGAATCATA
CCTGGATGGC TGGAATTCGG GTGCAATGAT TGCGGACTGT GTGTGAATAT CTGCCCCACC
GGGGCAATCT CACGAGAGGG TTCCTCCTAT AGCCTGGATC TGGATAAATG TATTAACTGC
AGCATCTGTA CCGCCAGTTG TCCAACCGGG TCCTGGGTGG CTGTCCAGAA GGGATATATT
CTCTGGATCG GGGGGACCAT GGGAAAAATC CCCCGTCTGG CAAGCCGGCT TGATGGTGTG
ATCGAGTCCA AGGAGCGGCT CTATGAACTC ATCAAACGTG CCGTCACCTA TTACCGGGAG
AATGGCCGGA AAAAGGAGCG GTTCGGGCAC ATGATCGATC GGATCGGTCT TGAGACTGTG
AAAGCGGAGA TATTACATGG GAAATGA
|
|---|
| Protein sequence | MTNEIIDLAA LKKTGMIQQK QKEFFALRLH SVGGDFTTQQ IRGIAEIADT FGKGQIHLST
RQGIEIHFVH GADLEKAKSE LEAVGVTMGA CGPRIRVITA CPGTLTCRWG IIDTKEISGY
LDTTYFREET PHKFKMAVTG CPHNCAKATE NDIGVMGGII PGWLEFGCND CGLCVNICPT
GAISREGSSY SLDLDKCINC SICTASCPTG SWVAVQKGYI LWIGGTMGKI PRLASRLDGV
IESKERLYEL IKRAVTYYRE NGRKKERFGH MIDRIGLETV KAEILHGK
|
|---|
| |